Macrobrachium rosenbergii (giant freshwater prawn): 136844393
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Entry
136844393 CDS
T10429
Name
(RefSeq) uncharacterized protein isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136844393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mrj03041
]
136844393
03009 Ribosome biogenesis [BR:
mrj03009
]
136844393
Enzymes [BR:
mrj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
136844393
Spliceosome [BR:
mrj03041
]
Complex A
U1 snRNP components
U1 related factors
136844393
Complex B
136844393
Ribosome biogenesis [BR:
mrj03009
]
Eukaryotic type
Pre-60S particles
Helicases
136844393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
136844393
NCBI-ProteinID:
XP_066969615
LinkDB
All DBs
Position
12:13129938..13146465
Genome browser
AA seq
667 aa
AA seq
DB search
MSYRNSRRSRSRSRSRDRDRDRDRDRDRRRDRDDGWSGARSGGGGGAGGYGGGGYGGGRP
SLKGRQPGERLRKPKWDLSRLAPFEKNFYQPTPQVLNRSPYEVEQYRNEKEITLRGKNIP
NPIQYFTDYNFPDYVMAEIRRQGYEIPTPIQAQGWPISLQGRDFVGIAQTGSGKTLGYIL
PAIVHINHQPYLERGDGPIALVLAPTRELAQQILTVSQDFGASSKIRSTCVFGGAPKGPQ
IRDLERGVEICIATPGRLIDFLEANKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIR
PDRQTLMWSATWPKEVRNLAEDFLKDYIQLNVGSLSLSANHNILQIVDVCQEIEKDTKLR
QLLNEMAQEKAYKTIIFIETKRKVEEVTRGLRSTGWPAMCIHGDKSQQERDWVLSEFRSG
RAPILVATDVAARGLDVDDVKFVINYDYPSCSEDYVHRIGRTGRSDKTGTAYTFFTADNC
KQAKDLIDVLKEANQVVNPRLFEIMEMSRHGGGKGRTRWRGRDDDRRGGYGRDRDRDRDR
DRDRDRGRMGGGRNGYTNGNGYGTSHQRAGGFNQYGSGGKSNYMPNGVGESRSRYGGPPP
LMGTGPAKGSMSQSGASGQMNGPQRPAVQNQGNNMALMNQAASMGGTVNGGLGMMGAMPG
ALSWPRQ
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacagaaacagcagacggtctcgctcccgttctcgttcccgcgaccgtgaccgt
gatcgtgatcgtgatcgggatcgtcgtcgtgacagggatgatgggtggagcggtgcgcga
agtggtggtggtggaggcgctggcggatatggaggaggagggtatggaggtggtcgaccg
tccttgaagggaaggcagccaggtgagcgtttgcggaagccgaagtgggacctatccaga
ctagcccctttcgagaagaacttctaccagccaacaccacaagtcctaaacagatcaccg
tatgaagtagaacagtataggaatgagaaagaaatcacattaagaggaaaaaatatccca
aatccaattcagtacttcacagactacaacttcccagattatgttatggcagaaattcgt
agacaagggtatgaaattccgactccaattcaggcacaagggtggcccatttctcttcag
ggaagagattttgtgggtattgcacagactggctcagggaaaactttaggttatatccta
ccagcaattgtacatataaatcaccaaccatacttggagcgaggagatggccccatcgca
cttgttctagcgccaaccagagaacttgcccaacaaattttaacagtttcacaggatttt
ggagcgtcctctaagatccgttctacatgtgtatttggaggtgcaccgaagggaccacaa
attcgtgacttggagagaggagttgagatctgtatagccacacctggaagacttatagat
ttcttagaggccaataaaacaaatcttcgacgatgcacctacctagttttagatgaggcg
gatcgtatgctcgacatgggttttgagcctcaaataagaaaaatagtagatcagatcaga
ccggacagacaaacattgatgtggtctgctacgtggcccaaggaagttcggaatcttgct
gaagattttcttaaagattatattcagctcaacgttggctctctatcgttaagtgcaaat
cacaacattctacagatcgttgatgtttgtcaagaaattgaaaaagatacaaagctgcgc
cagttgctcaatgagatggcgcaggagaaggcttacaagactataatctttatcgagacg
aagaggaaggtggaggaggttactcgtgggttgaggagtactgggtggccagccatgtgt
atccatggtgacaaatcacagcaagagagggattgggtgttgagtgagtttcggtcgggg
agagcgcccatattagtcgccacagatgttgctgctcgtggtctagatgtggatgatgtg
aagttcgtgatcaactacgactacccatcatgttcagaggattatgttcaccgaatcggt
cgaactgggaggtctgacaagaccggaacagcgtatactttcttcactgcagacaattgc
aaacaagctaaagatctgatagatgtgttaaaggaagcaaaccaggttgttaacccaaga
ctgttcgaaatcatggaaatgtctcgccatggtggtggcaaaggtcgaactcgctggagg
ggccgtgatgatgacagaaggggaggttatggccgcgaccgtgaccgcgaccgcgatcgt
gaccgtgaccgtgaccgcggtcgtatgggtggtggaaggaatggctacaccaatggaaat
ggttatggtacgtctcaccagagggctggaggatttaaccagtatggaagcggaggcaaa
agcaattatatgcctaatggtgtgggtgagagccgaagccgatatggcggtcctcctcct
ctaatgggtactggtcctgccaaaggaagtatgagccaatcaggtgcctcaggccagatg
aatggcccccagcgtccagccgtccagaatcagggaaacaacatggcattgatgaaccaa
gccgcctccatgggtggtacagttaatggtggcctcggcatgatgggggccatgcctggt
gcactttcctggccgcggcagtaa
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