Macrobrachium rosenbergii (giant freshwater prawn): 136844984
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Entry
136844984 CDS
T10429
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mrj04131
]
136844984
Membrane trafficking [BR:
mrj04131
]
Protein recycling
Others
Retriever complex
136844984
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps35
ToxA_N
DUF5063
XPC-binding
Motif
Other DBs
NCBI-GeneID:
136844984
NCBI-ProteinID:
XP_066970586
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All DBs
Position
13:complement(21553862..21593588)
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AA seq
983 aa
AA seq
DB search
MAVSWKVVARQWGAEKQLVVLKPATSHPLQGVKDRGMVQNASSREKKMKSSISQQIISDP
LSAILDGPDPLSDLLSAPDPLSSASGPTSSRKKLDEAEESGLNASESKKNSWEQQKAFLL
ANFTTTATLTFTSSFLQPTETTESRIISSQRRVVKTQTSVTDRSKTQGMSGSERIRARLE
QLDSLDDAGGGGLLREVGGLTQSEFILRLNGLKMELTQAWNTDHRVKALKIAIQVCHLIC
LSRPEHFYPMKFLLLVMDILDTLASLVHERLQQKSKTRRNSTNGTSDYGMLEAQETARNW
FYKVASIRELLPRLYLEASLLPCYALLSVQEGEEALSRLTRMIRGIGDPLIASYARMFLC
RMGVDVAPQLTQYITENIEDFLQTLKQGLWPEGEADVNMGEDKDALAVRVLSPPLEWMMQ
CLACRAPHHVLQTVLQHCEEGEGLGQNLLVAALLTTFPHSFIAVNAIPLTHLIAGCSYPG
KSQHELVSALGVCVNDAAPAPQQHLPLLNAVWKLITRIPLTKDYLSTAGIWLEFTAKHFT
ATEVNTLLGDVLKRVRSAHNQEQVPYPVLLKLISTALTNSPDPQSLFPMTNFQGVLSVFQ
RDSVSAGDGVTWGVTEALLNNHPGEFTDPTLVQHLLTLCGALHDSINALTTDDERRQLSH
LITTFIRQVDFGRDFEQQLDFYVNARAAFSNLDTVLRALVQCVCHLAMATWSVMRGQHTG
KTAAFVRACAAYCFITIPSLSTPSIRLKLYLLSGTVALINGCLGQGDACMKAAIREVLEM
AGSQDAEAGGQLSEVLRSSVASLASTLIATPDPPDASPPLYLLRGLTNAVKSYQWPKDTD
LQAYLSLSLLNAISASAQDTLPYHIHNVEGNDSLYGGDPMVQQEAEQLCTSLIKDIVAHM
QGLNGVNEKRIGPLAMNTLWSLVTWCDLSQVEMMNTASFLWSLMLKHSQPQVLVQTKTWV
SRRALQLKDPYLEQLAKTVNLTR
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggcagtatcatggaaggtggtggcaaggcagtggggtgcagaaaaacagcttgtggta
ctcaagccagccacaagtcatccactacaaggggtcaaagacagaggtatggtacaaaat
gcaagttccagggagaagaagatgaaatcatcgatttcacagcaaattattagtgatcca
ttgtctgccatattagatggaccagaccctctcagtgacctgctcagtgctccagacccg
ctctcttcagcctctggacctaccagctctcgtaagaaattagatgaagcagaggaatca
ggcttgaatgccagtgaatctaagaaaaacagctgggagcaacagaaagcatttcttctc
gctaattttacaacaacagctaccctcacttttacatcaagctttttgcaaccaacagag
accactgagagcagaatcatttcatctcagagacgtgttgtgaaaactcagacatcagtc
actgacagatccaaaactcagggaatgagtggaagtgaaaggattcgagcacgtttagaa
cagctagattcactggatgatgctggtggaggagggctcttacgtgaagttggaggcctc
actcagagtgaattcattcttcgtttaaatgggttgaaaatggaactcacacaagcctgg
aacacagatcatcgtgtgaaggcgctgaaaattgctatccaggtgtgtcatttgatctgt
ctgtcaagacctgaacatttttatccaatgaagtttctgctcctggtgatggacattttg
gatactttggcctcattagtgcatgaacggcttcagcagaaatctaaaaccaggcgtaat
tctacaaatggtaccagtgactatggaatgttagaagcacaagaaacagcacgcaattgg
ttctacaaggtggcatcaataagagagttgcttccgaggctataccttgaagcttctctc
ttaccttgctatgcccttcttagtgtccaagagggtgaagaagctttgtctcgtctgact
cgcatgattagaggcattggggatcctttaattgcttcttatgctcgaatgtttctctgc
cgaatgggggtggatgtagctcctcagctgacacagtatatcacagagaacattgaagat
tttttgcagactttgaaacaggggttgtggcctgagggggaagctgatgtcaacatggga
gaagacaaggatgctctggcagtacgtgtcttgtctcctcccctcgagtggatgatgcaa
tgtcttgcttgtcgagctcctcatcatgtcctgcagactgtgttacagcattgtgaagaa
ggggaaggacttggacagaacttgttagttgcagcattactcactacattcccacatagc
ttcattgctgtaaatgctattcctctcactcaccttatagcaggttgttcttacccaggg
aagagtcagcacgagctggtttcagctcttggtgtttgtgtgaatgatgctgctccagcc
ccacagcagcacttgcctcttcttaatgctgtatggaagctcatcacgagaatcccactt
accaaggattatctctccactgctggcatttggcttgaatttactgcaaagcattttacg
gcaacagaagtaaacactttacttggagatgtattgaaacgtgtgagatcagcacacaat
caagaacaggtgccttatcctgtcctcttaaagcttatttctacagctcttaccaattct
cctgatcctcagtccctttttccaatgacaaatttccagggtgtcttgagtgtgtttcag
cgagatagcgtcagtgctggtgatggtgttacttggggtgttacagaagccttgctaaat
aatcatcctggagaattcacagatcctactctagtccaacaccttttgactctctgtgga
gcactccatgattccataaatgccctcacaacagatgatgaaagaaggcagctgtctcat
cttattacaacttttattcgacaagttgattttggtcgagattttgaacaacaactagat
ttctatgtgaatgccagagcagccttctcaaacctagacacagttctccgagcactcgta
cagtgtgtctgccatcttgctatggccacttggagtgtaatgagaggccagcatacagga
aaaacagcagcctttgtgcgcgcatgtgctgcatattgcttcattaccattccttcatta
tcaacaccttccattagactgaagctctatttgttgtcagggacagttgcactgataaat
ggttgcttgggacaaggagatgcttgcatgaaggctgctatcagagaggttttagaaatg
gctggttcacaggatgcagaagctggtggccagttatcagaggtccttcgctcctctgtt
gccagtttggcttctacgctgatagcaacccctgatccacctgatgcatcgccccctctc
taccttctccgtggacttactaatgctgtgaagtcataccagtggcctaaggatacagat
ctccaggcatacttgtcactgtctttactgaatgccatttctgcatcagctcaggatacc
ttaccttatcatattcacaatgtggaaggcaatgattctttgtatggtggtgaccctatg
gtgcagcaagaggcagaacagttgtgcacatctttaataaaagatattgtagctcatatg
cagggtctgaatggtgttaatgaaaagcgtattggaccattggccatgaatactttgtgg
agtctggttacttggtgtgaccttagtcaagttgaaatgatgaatacagcttcattcctt
tggtctttaatgctcaagcatagccagcctcaggtattggtccaaacaaagacctgggta
tcaagacgtgcactccagctcaaggatccttatctagaacagttggcgaaaactgtaaat
cttactaggtaa
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