Macrobrachium rosenbergii (giant freshwater prawn): 136845965
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Entry
136845965 CDS
T10429
Symbol
RfC4
Name
(RefSeq) replication factor C subunit 2 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03030
DNA replication
mrj03410
Base excision repair
mrj03420
Nucleotide excision repair
mrj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
136845965 (RfC4)
03410 Base excision repair
136845965 (RfC4)
03420 Nucleotide excision repair
136845965 (RfC4)
03430 Mismatch repair
136845965 (RfC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mrj03032
]
136845965 (RfC4)
03036 Chromosome and associated proteins [BR:
mrj03036
]
136845965 (RfC4)
03400 DNA repair and recombination proteins [BR:
mrj03400
]
136845965 (RfC4)
DNA replication proteins [BR:
mrj03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
136845965 (RfC4)
DNA Replication Termination Factors
ELG1-RFC complex
136845965 (RfC4)
Chromosome and associated proteins [BR:
mrj03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
136845965 (RfC4)
DNA repair and recombination proteins [BR:
mrj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
136845965 (RfC4)
Check point factors
HRAD17(Rad24)-RFC complex
136845965 (RfC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_22
AAA_16
RCF1-5-like_lid
AAA_24
Mg_chelatase
Viral_helicase1
Rad17
nSTAND3
AAA_11
AAA_18
RuvB_N
AAA_assoc_2
AAA_23
AAA_19
AAA_5
NTPase_1
ABC_tran
MipZ
RNA_helicase
MeaB
AAA_28
DNAX_ATPase_lid
AAA_25
IstB_IS21
AAA_30
AAA_3
ATPase_2
CbiA
Motif
Other DBs
NCBI-GeneID:
136845965
NCBI-ProteinID:
XP_066972612
LinkDB
All DBs
Position
14:38586871..38612535
Genome browser
AA seq
350 aa
AA seq
DB search
MSDSKMEVDEQPGPSSSAKTTTSTSKSSHTPWIEKYRPIVFTDIVGNEETVARLEVFAKQ
GNVPNIIIAGPPGVGKTTTILCLARALLGPTFKDAVLELNASNDRGIDVVRNKIKMFAQQ
KVTLPKGRHKIIILDEADSMTEGAQQALRRTMELYSSTTRFALACNSSEKIIEPIQSRCA
MLRYSKLSDAQILSKVLQVCSKEDVSYTEDGIEAIVFTAQGDMRQALNNLQSTSQGLGHV
SSENVFKVCDEPHPLLVKEMLLHCVKTDFDDAYKVLAHLWKMGYAAEDIISNIFRVCKHT
PMAEFLKLEFIKEIGYTHLRIIQGTSSLLQLSGLLARLCSKSLDSSKSIS
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactcaaaaatggaagtagatgaacaacccgggccaagttcttcggctaaaaca
acaacttcaacgtctaaaagctctcacacgccatggatagagaagtaccggcctatagtc
ttcacagatatagttggcaatgaagagactgtggctcgacttgaagtttttgcaaagcag
ggaaatgtaccaaatatcataatagcgggtccaccaggtgttggtaaaactacaacaatc
ctgtgtcttgctcgtgctctgttgggtcctaccttcaaggatgctgttttagaattaaat
gcttcaaatgaccgaggtatagatgttgtgagaaacaagatcaagatgtttgcacagcaa
aaagtcacattgcccaaaggacgtcacaaaatcattattttagatgaagcagacagcatg
acagaaggagcccagcaagctttaagaagaacaatggagttatattcatctacaactcga
tttgctcttgcatgtaattcttctgagaagatcattgaacccattcagtcacgttgcgct
atgttacggtactcaaaattaagtgatgcacagattctttcaaaagtgctacaagtttgc
agtaaagaagatgtgagctatacggaagatggtattgaggccattgtctttacagcccaa
ggtgatatgcggcaagcactaaacaatcttcagtctacatcccaaggtcttggtcacgtg
tcttctgaaaatgtattcaaggtttgtgatgaacctcatcccctattagttaaagaaatg
ctcctacattgtgtaaagacggactttgatgatgcttacaaggtattagctcacctttgg
aaaatgggctacgctgcagaggatatcattagtaatattttccgtgtatgtaaacataca
cctatggcagagttcttgaaactggaatttataaaggaaattggctacacccatcttcgt
atcatccagggaacgtcttcattactgcagttatcagggcttttagctagattgtgctca
aagtcccttgatagctcaaaaagcatatcttga
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