Macrobrachium rosenbergii (giant freshwater prawn): 136845981
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Entry
136845981 CDS
T10429
Symbol
Clp
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
136845981 (Clp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrj03021
]
136845981 (Clp)
03019 Messenger RNA biogenesis [BR:
mrj03019
]
136845981 (Clp)
Transcription machinery [BR:
mrj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
136845981 (Clp)
Messenger RNA biogenesis [BR:
mrj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
136845981 (Clp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCHC
zf-CCCH_3
zf-CCCH_2
zf-CCCH_4
zf-CCHC_4
zf-C2H2_10
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
136845981
NCBI-ProteinID:
XP_066972649
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Position
14:complement(39919214..39975405)
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AA seq
282 aa
AA seq
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MAPVLPVLVWKFDRTKHCRTAAFSTLILAQPWNPWASSKESVAAVCTFYLRGSCNKSVNC
PFRHVRGDRTVVCKHWLRGLCKKGDQCEFLHEYDMSKMPECYFYSRFNACHNKECPFLHI
NPDLRIKDCPWYDRGFCRHGPQCRNRHVRRVLCMNYFSGFCPDGPNCKFMHPRFELPQVM
EERTTSGKNREITCHYCGEAGHKASHCPKSNPELREQNAIISLASGGPKTQGGKENAGPI
PLPHHLNDNNRLENIVCFKCGQQGHFANRCTKGQFAFLSSTN
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggcaccagtattaccagtattagtatggaagtttgataggacaaaacattgcaggact
gcagccttctccaccctaatactagcccaaccctggaatccttgggcaagctctaaagaa
tctgtagctgctgtgtgcacattctatctccgtggaagctgcaacaagagtgtcaattgc
cctttccgacatgtgcggggagatcgtacagtggtttgcaaacactggcttcgtggtttg
tgcaagaagggtgaccagtgtgaatttcttcatgaatacgacatgtctaaaatgccagag
tgttatttttattccagatttaatgcttgtcataataaggagtgccccttcttgcatata
aatccagatttgagaataaaagattgtccatggtatgacagaggcttttgtcgccatggc
cctcagtgcagaaatcgccatgttcgccgtgtgttgtgtatgaactacttttctggattt
tgccctgatggtcccaattgcaaattcatgcatcccagattcgagctgccccaggttatg
gaagagagaactacttcaggaaagaatagagagataacctgtcactattgtggtgaagct
ggtcataaagcttcacactgtccaaagtcaaatcctgaactcagggagcaaaatgctatt
attagccttgcttctggaggtccaaaaacacaaggaggcaaagaaaatgctggtcctata
cccctgccacatcatcttaatgataacaacagattagaaaacattgtttgctttaagtgt
ggtcaacaaggacattttgccaacagatgtactaaaggacagtttgctttcctgagttcc
actaactga
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