Macrobrachium rosenbergii (giant freshwater prawn): 136847105
Help
Entry
136847105 CDS
T10429
Symbol
rdgB
Name
(RefSeq) protein retinal degeneration B isoform X1
KO
K24069
membrane-associated phosphatidylinositol transfer protein
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mrj04131
]
136847105 (rdgB)
Membrane trafficking [BR:
mrj04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
136847105 (rdgB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IP_trans
LNS2_PITM1-3
PITM1-3
DDHD
LNS2
Acid_phosphat_B
Abhydrolase_3
Transthyretin
Motif
Other DBs
NCBI-GeneID:
136847105
NCBI-ProteinID:
XP_066974525
LinkDB
All DBs
Position
2:complement(54706501..55018195)
Genome browser
AA seq
1622 aa
AA seq
DB search
MVQTVEYRIPLPLTVEEYRIAQLYMLAKKSRQESHGEGSGVEILVNEPYENGPGPDGKGQ
YTHKVYHVGSHLPGWLKSLIPKSALSVEEEAWNAYPYTKTRFTCPFVEKFSIEVETYYFN
DGGHQDNVFKLSKSEMKQREVDLIDVVKDQLYGADYKEEEDPRKYTSEKTGRGPLGENWI
QEYWEICKDVPQTPLPTGEAIMCAYKLCKVEFRYWGMQTKIEKFIHDIALRKTMLRAHRQ
AWAWMDEWWGLTIEDIRNIELETQALLAKKYGGEAEEGDDDLAGTDSGSPEATAEIPQSP
SVSSDRTPILEQLSESSSFRTSNDLSEDPSVVYNEDGSVMKGIINNNNNNNVDSVENRRS
SGTSPKLKKRELNVSMDSVVVDENKKRGSWSRSGSRNTLNSQNQANWRMESIRRDSDSSG
SDDEFFDCQEDLEENAALHKWSSLELLPHDGDSHASVSEAGNEDSIFSQTFMSRVAAERH
SRVLGRSMEASAPSSPSHSPSHQPGPCSTTVLLLVIHAGSVLDPNPDVTNKRSDFTTFRG
ALESVMRQHYPQMVGHIAIRLVPAPAVCSDSLNILSSLSPYGLDSSPVCGEVSGGDNIPV
GAVPLMATTIPEYEEAVVRTLNATNAAYHEFLKSEEGEGFTGQVGIIGDSIGGILAYDVL
CRAHDQHKFGSNSNIPEGEPPSPGQYCKQKSSPGQPLHPSSLSPASPPKGSPDPPSSSSP
TITVSPESALKSVAGDVFSSSPPSPQNQPLCSTSSQSSSLTRISSHPSLSKIFSSQTSQP
SLSNKLPSPQTPQPIVSSKIHSPQTPCQPVPPSKIMSPQIPSQPSITSKIQPTSTPHPSG
PSKIPSPQSPQPSFSSKIQPLSQPAVSSKIQNPPQPSVCKSQSPSHPSVSSKALQPQVSP
QNPLRKISAPLPMSSTSGQLVRKCSAPCSIPGIGINVCTTLTPSPPGVTYTSPSNPQLYL
SYQSQSYHHSYHSTFHHAQHQGYSNFPDILTHAPLCDKRGDDAGGECGGRIYRKSMSNDA
PHHPEVPPSRSVSDSTYHYNSHLTAPFPRRRSSSSSDQGHSKLDFEVTDFFMFGCPLSMV
LVYRKMVGLGDKNCESDVIQRPACQQVYNLFHPTDPLAVRLEPLLSARFSLLPPITIPRY
TKYPLGDGIPTHLLECIQTNGGVFLDVSGATGSPSLAGHSRRMSDASILSTVSGMADTVP
LATIKALSQRWWGNKRLDYALYCPEGLANFPTNSLPHLFHASYWESSDVIAFILRQLVRT
DHAGQMADEKDLPVFSPTQPREKWIKKRTSVKIKNVAANHRGNDVIVREGAPQCLQARFM
YGPLDMVALSGEKVDIHIMSDPPGGDWQQISTEVTDKNGRITFTIPPERSLLCGMYPVKM
VVRGDHTSATLYLTVVPPKTECVVFSIDGSFTASVSVTGRDPKVRAGAVDVVRHWQELGY
LIIYVTGRPDMQQQKVVSWLAQHNFPHGLVSFADGLSRDPLGHKADYLRGLINDHAVVVM
AAYGSSKDITVYNSIGLKPEQIYIVGKASKKQHATAQVLTEGYAAHLTSLSALGKSRPAK
GNPQMVIPRVFFGLPGQSSALRRRRSAKRTTSFPVLGVSANEGIVRSRGSSHSPRPNHMS
MK
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atggttcagacagtggagtaccgcattccactgcctctgacagtagaagagtaccggatt
gctcaactctacatgttagcgaaaaagtcacgacaagaaagtcatggcgaaggcagtggt
gtcgaaatcttggtcaatgagccatacgaaaatggaccggggccagatggcaaaggacag
tatacccataaagtctatcatgttgggagccatttgccaggctggctcaagtctctcatt
cctaagtcagccttatctgttgaagaggaggcttggaatgcctacccttataccaaaaca
cgtttcacttgcccatttgttgaaaaattcagcattgaggttgaaacctactacttcaat
gatggtgggcatcaggataatgtatttaaactttcaaagtctgagatgaagcaacgagaa
gtagatttaattgatgttgtaaaagatcagttatatggagcagactataaagaagaggaa
gaccctcgtaaatacacttctgagaagactggaagaggtcctcttggcgaaaactggata
caagaatactgggaaatatgcaaggatgttccacaaacgccattaccaactggagaagca
attatgtgtgcctataaactatgtaaagtagaattccgttactggggcatgcaaaccaaa
attgaaaagtttatacatgatatagcgttacgaaaaacaatgttacgtgctcacagacaa
gcatgggcatggatggatgaatggtggggcctcactatagaggacattcgtaatattgaa
cttgaaactcaagctcttttagctaagaaatatggtggagaagcagaagaaggagatgat
gatctggcaggcacggatagtgggtcaccagaggcaacagcagaaatacctcagagtcca
agtgtttcgtcagatcggacacctatacttgaacaattgagtgaatcaagctcgtttagg
actagtaatgacttgagtgaagacccatctgttgtgtataatgaagatggttctgtgatg
aaaggtattattaataacaacaataataataatgtggacagtgtggaaaacaggaggagt
tctggtacaagtcctaaactaaaaaaaagagagctcaatgtcagtatggatagtgttgtg
gtggatgaaaataaaaagaggggatcctggtcaaggagtggttctagaaacacattgaat
tcacagaatcaagcaaattggagaatggagagcattagaagggattcagactcgtcagga
agtgatgatgaattcttcgactgtcaagaggatcttgaggaaaatgcagcacttcataag
tggagttcacttgagttgctgccccatgatggagattctcatgcttctgtttcagaagca
ggaaatgaagacagtatcttttcgcaaaccttcatgtcacgggtagcggctgagcgccat
agtcgtgtattagggcgtagcatggaagcttctgctccatcttccccgtcccactccccg
tcccaccaacctggcccttgttcaactacggtccttctcttggtgattcatgctggttcc
gtccttgaccctaatccagatgtaaccaacaagaggagtgatttcacaacatttcgagga
gctcttgaatcagttatgcgtcaacactatcctcaaatggttggccatatagcgataaga
cttgtacctgcacctgcagtctgctcagatagtctcaatattttgtctagccttagccct
tatggcttagattcttctcctgtttgtggtgaagtgtcaggtggtgacaatataccagta
ggtgcagttccactcatggccacaactatacctgaatatgaagaagccgtagtacgtacc
ttgaatgcgaccaatgctgcttatcatgaatttctgaagtctgaagaaggggaaggattc
actggacaagttggtattattggtgacagtattggtggaattttagcatatgatgttctg
tgtagagcccatgatcaacataaatttggaagcaatagcaacattcctgagggagaacct
ccttccccgggtcagtactgcaagcagaagtcatcccccggacaacctctacacccatca
tctctttcccctgcatctccccccaaaggctccccagaccctccctcatcttcctctccc
actatcactgtcagtccagaatctgctcttaaaagtgttgcaggtgatgtattctcttcc
tcccctccttctcctcagaaccaacctttgtgttccacttcctcccagtcatcttctctg
accagaatttcttctcatccatctttgtccaagattttttcttctcagacttctcaaccc
tctttgtctaataagcttccctctccccagactcctcagccaatagtgtctagtaagatt
cattctcctcaaaccccttgtcagcctgttccacctagtaagattatgtctcctcagatc
ccatctcaaccttcaataactagtaaaattcagcctacttcaaccccacatccttcagga
ccaagtaagattccgtctccccaatctcctcaaccttcattttcaagtaaaattcagcca
ctttcacagcctgcagtgtctagtaagattcagaacccacctcaaccctcagtgtgtaaa
agtcagtccccttctcacccctctgtgtctagtaaggctcttcagccccaagttagtccc
cagaatccactaagaaagatatctgctcctttgccaatgtcttcaacatcaggtcaactc
gttagaaaatgttctgcaccatgtagtatacctggtattggtatcaatgtttgcaccacc
ctgactccctcaccacctggtgtcacttacacctctccttcaaatcctcagttgtaccta
agctaccagtctcaatcctaccaccactcttaccattccactttccatcatgcccaacat
cagggatacagtaacttccctgatatattgactcatgcgccactgtgtgacaaaagagga
gacgatgctggtggggaatgtggagggcgaatttatcgcaagtccatgagtaatgatgca
ccacaccatcctgaagttcccccatcccgttctgtctcggattcaacttaccattacaat
agtcatcttacggctccatttcctcgtagaagatcctcatcatccagtgaccaaggccac
agcaaattagactttgaagtgaccgatttctttatgtttggatgtccactttcaatggtg
ttagtctaccgtaaaatggttggcctgggagataagaactgtgagtcggatgtcattcag
cgtccggcctgtcaacaagtgtacaatttgtttcatccaactgatcccttggcagtacga
ttggaacccttattatcagcaaggttttctctcctcccacctatcactattccaagatac
acaaaatatcctcttggagatggcattcctactcatttacttgaatgtatacagacaaat
gggggtgttttccttgatgtcagtggagcaactggatcaccttcattagcaggtcattcc
cggcgtatgtctgatgcatctatattatctactgtatcaggaatggcagatacagttccc
ctcgcaacaataaaggccttaagccagcgttggtggggtaataagcggttggattatgca
ttatattgtccggaaggtttagccaatttccccacaaattccctgccacacctctttcat
gcatcatactgggagtcatcagatgttatagcctttatcctcagacagttggtaagaact
gatcatgctggtcagatggcagatgagaaggatttacctgtattctccccaacacaacca
agagaaaaatggattaaaaagagaacctcagtaaagatcaagaatgttgcagcaaatcat
agaggaaatgatgtgattgttcgagaaggtgctccacagtgtcttcaagcacgcttcatg
tatggaccactagatatggttgcactctcaggggaaaaggtggacatacatattatgtct
gatccacctggtggtgactggcagcagatcagcacagaagtaacagacaaaaatgggcgt
atcactttcaccattcctcctgaaaggtctctcttatgtggcatgtatccagtcaaaatg
gttgtcagaggcgatcacaccagtgctactctatatttgactgttgtacctcccaaaact
gaatgtgttgtgttcagcattgatggttcttttactgcatctgtatctgttactgggaga
gatcctaaagtgagagcaggagctgttgatgttgtaagacattggcaagagctagggtac
ctgattatttatgtgactgggcgacctgatatgcaacagcagaaggtggtgtcttggctt
gcccagcataatttccctcatggtcttgtttcctttgctgatggtctctctagagaccca
ctaggtcacaaagctgattatttaaggggattgattaatgatcatgctgtagtggttatg
gcagcttatggaagttcaaaagacatcactgtttacaacagtattggccttaaacctgaa
cagatctacatagttggaaaagccagcaaaaaacagcatgccacagcacaggtgttgaca
gaaggttatgctgctcacttgacttccctgtcagcattggggaaatcccgtccagcaaaa
ggcaatccacagatggtgatcccacgtgtgttctttggcctacctggtcagagcagtgct
ctgcggagaagacgttctgccaagcggactacgtcttttcccgtcctgggagtttcagca
aatgagggaatcgttcgttctcgaggatcatctcactctcccaggcccaaccacatgagt
atgaaatga
DBGET
integrated database retrieval system
