Macrobrachium rosenbergii (giant freshwater prawn): 136847113
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Entry
136847113 CDS
T10429
Name
(RefSeq) DNA excision repair protein ERCC-6-like isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
136847113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mrj03036
]
136847113
03400 DNA repair and recombination proteins [BR:
mrj03400
]
136847113
Chromosome and associated proteins [BR:
mrj03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
136847113
DNA repair and recombination proteins [BR:
mrj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
136847113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Motif
Other DBs
NCBI-GeneID:
136847113
NCBI-ProteinID:
XP_066974548
LinkDB
All DBs
Position
16:16879688..17128323
Genome browser
AA seq
1758 aa
AA seq
DB search
MRTIRRRFELAVNKVLAENGTHPPIAELSQLSSNCRMDALLVENRITSTSSQDAQSPEND
DRSNDTGAKDGSSNIAKWNQTSILESMLKEAKNTEEAKGVDQDLKDQDEELRALGISVVD
QLSLERDVEAAVDKAVTVHARKQRMQMLKKEIQDVKKELKQGDLKLHILSERLSGMRRRV
VDPRQYFNVEKEMKSKDEQLKVLKSREEYLMEKLSAAENNEAELDDLELEDGEIVEEGED
TLQEVNMDEKKSQMLGNEKERLIREGKMTPFGTVMSSSSSKTVSFVRPSVTQSEKRKSHV
AAQKKKSEKESLISTGEMTPFGSVVSTTKTVINSDREKKKTGTALTDFEKYLQDQIDRQK
EHCKTSKGMKRKKSSGDPSYGIPKRKRKPKEYVGDIDFDQDGREASDEEVSLSAIKSNVK
TNYEAKVSKGKRNDLKKKHRSKDPIKMKILHPKQKESKKVILGSVTSELEADRYKKAPRR
MLSEKVSFEGGESEMSHSEDDSGSEYIPSDREGSDADGDLREKKSQVREIMDRPKRKRTK
KVEIDDDYSLDEIPKSKGRRSLKEIDDGNIDDYVARIERWKEDRLKQKHAKILRGEDLDS
EEEEEGYEEFDGGYKVPLTIWNKLYKYQRTCVKWLWELHTQGCGGILGDEMGLGKTIQVI
SFLVGLSYSRLSERHQRWKGLGPVLIVCPATVLHQWVKEFHKWWPPFRVAILHESGSFIG
KRSSLIHNINKYDGILITSYTGVYSQVETLVQYKWHYIILDEGHKIRNPEAQITVALKRF
QTQHRLILSGSPIQNSLKELWSLFDFVFPGKLGTLPVFLAEFAVPITQGGYANASKLEVQ
TAFKCASVLRDTINPYLLRRMKNDVRNHLSLPDKNEQVLFCSLTEEQRSAYHEYLSGDQV
KWIMGGRMKVFVGLINLRKICNHPDLYTGGPRTYDGFESGLQPELKYGWWGRSGKMHVLQ
SILRLWSKQGHRVLLFTQSRQMMCILEKFLVDEEHSYLKMDGTTTVSSRQPLIDKFNVDT
SYFVFLLTTRVGGLGVNLTGADRVVIFDPDWNPSTDSQARERAWRIGQLRHVTIYRLLTS
GTIEEKIYHRQIFKQFLTNRVLKDPKQQRFFKTNDLYELFTLNEGEKEKTESSAIFAGTN
SEIKVDVNDDNQDSDEETCRNSKATNKQLKNTDRDVKKGHDDKSSSQMPVKREKPRKVSN
KDEKQKSDCTLSTGLKLQVDADLKERMRNLAKKISMNIAKKTLPEEKNTSSPQKCDSLKD
HPQGYEIDKSNKSEENSQDILTQDTMDIKNEVDEDSLDTKTEINEKQMDIKTEIDKEYTD
IKTEKGDEYMDMKAGTDKEHMEKIEIVEHEIEIEHEDLNGKNDPSNAFSVTQETGLNKLP
HIAKDMENIFVEHKPKVSEYHSISSFELNKETGCGNNSDSGNCSLLEDKLERHRKKHKKK
DKHKEREKLRDRDKKKSSHKKGKKIDGERIDYLVKKRIYRKTEEEEAAEKENAKSQDEYV
LTKLFKKSGVHTALSHDSILSNNDPDYLLMEGEAERVAKEALKAVRASRARCSRPWESHN
ETSEPKKSKHKFGGKKNRVFADSIDREIKKDEIKSKKDKERMFDGGLEDEDSDNPSEMDF
IPKKKIGNKTSNGLSSAQLLSRIHQRNKTVASTELTNDEPDEEYDPDYPSTAVSVEAEPE
EVEEEIQENIDLLTDIRNFVAFQAEVDGSASTQEIINRFRTRLPPSQTPFFKALLTKICD
FHRKSSGEGIWSLKEEFR
NT seq
5277 nt
NT seq
+upstream
nt +downstream
nt
atgaggacaattcgtcggagattcgaactcgcggtcaacaaagtgttagctgagaatgga
acccacccacccatcgcggaactgagtcagttgtcctcaaattgcagaatggatgctctc
ctggttgaaaacaggataacctccactagctcacaggatgctcagtcacctgagaatgat
gacaggagcaatgatactggagccaaggatggatccagtaatattgccaaatggaaccaa
accagtatattagaaagtatgttgaaggaagctaagaatactgaagaagccaaaggagtg
gaccaagatttgaaagatcaagatgaggagttgcgagcattgggtatatctgttgttgat
cagctctcattggaacgtgatgtcgaggctgcagtggataaagctgttactgttcatgca
cgtaagcaaaggatgcaaatgttaaaaaaggaaatccaggatgtcaagaaagaactcaag
caaggagacttaaaactccacatccttagtgaaaggctttcaggaatgagacggcgagtt
gttgatcctcgtcagtatttcaatgtagagaaggaaatgaaaagtaaagatgagcaactc
aaagtcctgaaaagtcgtgaagaatatctgatggagaaattgtcagctgcagaaaacaat
gaggcagagctggatgacctggagttagaagatggagaaattgtagaggaaggggaggac
accttacaggaagttaacatggatgaaaagaaatctcagatgctcgggaatgagaaagag
agactgatccgtgaagggaaaatgaccccttttggaactgtcatgtcttcctcttcaagt
aaaactgtatcttttgtacggcccagtgtcacccagtctgaaaagcggaagagtcatgtt
gctgctcaaaagaagaagagtgagaaagaaagtcttatcagcactggtgaaatgacaccc
tttggaagtgttgtcagcacaacaaagactgtaataaatagtgacagagagaaaaagaag
actggaactgcactgactgattttgagaaatatctgcaagaccaaattgatcgtcaaaag
gaacattgtaagaccagtaaaggtatgaaacgcaagaagtcgtctggtgacccaagttat
ggtataccaaaaagaaaacgaaagccaaaagaatatgttggtgatattgattttgaccaa
gatggcagggaagcaagtgatgaagaagtttccctctcagccattaagagtaatgtaaaa
acaaattatgaagctaaggtatcaaagggtaaaaggaatgatttgaaaaagaagcatcga
agtaaagaccctataaaaatgaagatcttgcatccaaaacagaaggaatctaagaaagtt
atccttggcagtgttacaagtgaactggaggctgaccgctacaaaaaagctccgaggagg
atgttgtcagagaaggtcagctttgagggaggtgagtcggaaatgtctcattctgaagac
gacagtggttctgaatacattccatcagatagggaaggttcagatgctgatggggacttg
agagagaaaaagagtcaagtaagagagattatggacagaccaaaaaggaaaagaacgaag
aaagttgagattgatgatgactattctcttgatgaaataccaaagagtaaaggaaggagg
tcattgaaagagattgatgatgggaatatagatgattatgtagcaagaatagagagatgg
aaggaagacaggttaaaacagaaacatgccaaaatcctcagaggtgaagacttggattct
gaagaggaagaagagggttatgaagaatttgatggaggatataaagtacctctcacaata
tggaataagttatacaagtatcaacgtacttgtgtcaagtggctctgggagctacacact
cagggctgtggagggattttgggagatgaaatgggccttggaaaaacaattcaggtgatt
tcttttcttgtaggcctttcttattctcgcttgagtgaacgtcatcagcgctggaaaggc
ttaggtcctgtgctgattgtgtgtcctgctactgtgcttcatcagtgggttaaagaattt
cacaaatggtggccacctttcagagttgctattctccatgaatcaggatcttttattgga
aagaggtcatctctgattcacaacattaataagtatgatggcatacttattacatcttat
actggtgtgtacagtcaggtagaaacactggtgcagtataaatggcattatataattctt
gatgaaggacacaagattcggaatccagaggcacagatcacagttgctctgaagaggttt
caaacgcaacatagacttatactctcagggtcaccaatccagaacagcttgaaagagttg
tggtcgttgtttgactttgtgtttcctggaaaacttggcacactgccagtgtttcttgca
gaatttgcagttcctattactcagggaggatatgctaatgcttccaaattagaggtccaa
acagcatttaaatgtgcatctgttctacgagataccatcaacccttatttacttcggaga
atgaagaatgatgtgagaaatcacttatcactgccagataaaaatgaacaggtattgttc
tgcagtttaacagaagaacagagaagtgcctatcatgaatacctcagtggagatcaagtc
aaatggatcatgggaggaagaatgaaggtttttgtgggactaattaatctgcggaagatt
tgcaatcacccagatttgtacactggtggacctcgtacctatgatggttttgaatctggt
ttacagcctgaattgaagtatggttggtggggccgctctggcaagatgcacgtccttcaa
tcaatattacggctgtggtcaaaacaagggcatcgtgtacttctttttacacagtcacgg
cagatgatgtgtattcttgaaaagttccttgtagatgaagaacattcctatttaaaaatg
gatggcaccaccactgtgtcatcacgccaaccgttaattgacaagttcaatgtagacact
tcatactttgtcttccttttgacaacccgtgttggaggactaggtgtgaacttgacagga
gcagacagagtcgttatatttgacccagactggaatccatccacagattcgcaagcaaga
gaacgtgcctggagaattgggcagttgcgccatgttacaatttataggttactcacatct
ggaacaattgaagaaaagatttaccacaggcagattttcaaacagtttttaactaatcgt
gtgctaaaagacccaaaacagcagcgttttttcaagaccaatgacttgtatgagcttttt
actttgaatgaaggtgagaaagagaaaacagaatcttctgccatatttgcaggaacaaat
tcagaaataaaggtagatgtaaatgatgataatcaggatagtgatgaagaaacatgtaga
aattccaaagctacaaataaacagttgaagaacactgatagagatgtcaaaaaagggcat
gatgataaatctagtagccaaatgcctgtcaaaagagagaagcccaggaaagtaagcaat
aaagatgagaagcaaaaatcagattgtactttgagcacaggtcttaaattacaggtagat
gcagatctgaaagaaagaatgagaaacttggccaagaaaattagcatgaacattgcaaag
aaaactttgccagaggagaaaaatacaagttccccccagaaatgtgatagtctcaaagat
catccccaaggttatgaaattgataaaagtaacaaatcagaagaaaatagccaggatatc
ctaactcaggatactatggatataaaaaatgaagtagatgaggatagtcttgatacaaaa
accgaaataaatgagaaacaaatggatataaaaactgaaatagacaaagagtacacagat
attaaaactgaaaaaggtgatgagtacatggatatgaaagctggaacagataaagaacat
atggaaaaaattgaaatagttgaacatgaaatagaaattgaacatgaagatctaaatggc
aaaaatgatccttccaatgctttttctgtgacacaagaaactggtcttaacaaattgcct
catattgcaaaagatatggaaaatatatttgtggagcacaagcctaaagtttctgaatac
cattccatcagcagttttgagcttaataaagaaacaggatgtggcaacaattctgacagt
ggaaactgtagcctactggaggataaattagagaggcatagaaaaaagcacaaaaagaaa
gataagcacaaggaaagagaaaaactcagagacagagataagaaaaagagttctcataag
aaaggtaagaagattgatggagagagaatagattacctagtaaagaaacggatataccgt
aaaacagaagaggaggaggcagctgaaaaagaaaatgccaaatcccaggatgaatatgtt
ctaacaaagctctttaagaaatcaggggttcacacagcccttagtcatgattcaatttta
agcaacaatgatccagattatcttcttatggaaggtgaagctgagagggtagccaaagaa
gcacttaaggctgtaagagcatctcgtgctcggtgtagtagaccttgggaatcccataat
gaaacgtcagaaccgaagaaaagtaaacacaagtttggaggtaagaagaacagagtgttt
gcggattccattgacagggaaataaagaaagacgaaataaaatccaagaaagacaaggaa
cgcatgttcgatggaggcttggaggatgaagattcagacaacccttcagagatggatttt
attcccaaaaagaaaattggaaataaaacttctaatggcctgtcatctgcacagttactt
tctcgtattcaccagagaaataaaactgttgcatccacagagttaacaaatgatgagcca
gatgaagagtatgatcctgattatccttccactgctgtatcagtagaagcagaacctgaa
gaagttgaagaggaaattcaggaaaatatagacttattaacagatataaggaactttgtt
gcatttcaggcagaagtagatggcagtgcatctacccaagagattattaacagattccgc
actagactgccaccatcacagactccattcttcaaggctcttttgaccaaaatttgtgat
ttccatagaaaatcatcaggtgaaggaatttggtctttgaaggaagaatttagataa
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integrated database retrieval system
