Macrobrachium rosenbergii (giant freshwater prawn): 136847226
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Entry
136847226 CDS
T10429
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mrj01009
]
136847226
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrj03021
]
136847226
Enzymes [BR:
mrj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
136847226
Protein phosphatases and associated proteins [BR:
mrj01009
]
HAD phosphatases
Fcp/Scp phosphatases
136847226
Transcription machinery [BR:
mrj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
136847226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
DUF6857
Ribosomal_L34e
PP_kinase_N
Motif
Other DBs
NCBI-GeneID:
136847226
NCBI-ProteinID:
XP_066974791
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All DBs
Position
16:complement(26552583..26574425)
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AA seq
592 aa
AA seq
DB search
MKRKLSFLCIASCYVPTLCTLSTNSKQFLKVRMAPPGKAHKKSKQRPKHQECSRRTEGVQ
ATRERMVSSQKKSQKIFLNLVEDTVDAEKLVEFLCYINPDIYEQAETDRGASGLCGYPLC
PNEFVDRYGDQRYKIRNNRLYDITLRRNFCSDVCYEASQIVKKQVSMEPLYLRDDLPRRS
LEVVIPDREDLKGQYGEEIDIEGGVNPFFTSQAQKTSKSFTSFAEVAQDGLSMCAENSQE
LDKENRKSDGAHEDKKQNSQGQETVKLQEDIGEGKQKKSVWRQKEDKPPEEELFHAHTAV
IKIERALHEWMTFESLRMVLGDKYVKGMLEDFGAKWEDFDSSEGMKLSVEAKAKYIALCR
KLDEEERNDRFGQGMEIREVVGQPRCPLPNYQQLQEDAKKQQLKVVSFLGGKDQYEDAAD
DVVDKDDEGSSSLPLIDSYSQVEWRQSIVLEKFEKYIRSFLPLAKLDEAKVNSLVRDLVM
TFNFSPNNIIFKPGEWNFVSLLVLKMLSIRIPAIKAGMEMEDFQKFQNTLLSNFHLDFGY
PDRFLSFITEIRHIIRRQVVSNAQSNPEDLVQNFNKVNVTGDAKTTESKDQT
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaagctgtccttcctctgcattgcatcatgttatgttcctactctttgcact
ctgtcaacaaactcgaaacaatttctgaaagttaggatggctcctccaggaaaggcacac
aaaaaatcaaaacagaggccaaagcatcaagaatgttccaggagaactgagggagtacaa
gcaacacgggagcgtatggtatcatctcagaagaaatctcagaagatatttttgaattta
gtggaagatactgtggatgcagaaaagcttgtcgagtttctttgctacatcaatccagat
atatatgaacaagctgaaacagatcgaggagcttcaggactctgtggctatcctttgtgt
cccaatgaatttgttgatcgttatggtgaccagcgctataagattcgtaacaacagactg
tatgacatcacattaagaaggaacttttgcagtgatgtgtgctatgaagcatcccaaata
gtaaagaagcaagtttcgatggagccactgtatctgagagatgatttgccaagaagaagt
ctggaagttgttattcctgatagggaagatctcaaaggccaatatggagaagaaattgac
attgaaggtggagtaaaccccttcttcaccagccaagcacaaaaaacttcaaagtctttt
acatcttttgctgaagttgctcaggatggacttagtatgtgtgctgaaaactctcaagaa
cttgacaaagaaaacagaaaatcagatggtgctcatgaagataaaaagcagaattcacaa
ggtcaagaaacagttaaacttcaagaggacataggagaaggaaaacagaaaaaatcagta
tggcgacaaaaagaagataagcccccagaggaagaactatttcatgcacatacagctgtc
ataaagattgaacgtgcattacacgaatggatgacttttgaatctttacgcatggtgttg
ggtgacaaatatgtcaaagggatgttggaagattttggggcaaaatgggaagattttgac
tctagtgaaggcatgaaacttagtgttgaagccaaggcaaagtacattgcactatgtagg
aaacttgatgaagaagaaagaaatgatagatttggccagggtatggaaattcgtgaagta
gttggtcaaccaaggtgtccattgcctaattatcaacaacttcaagaggatgctaaaaag
caacagctaaaggtagtatcgtttcttggagggaaggatcagtatgaagacgctgcagat
gatgtagttgataaagatgatgagggcagttcatcattacctctgattgacagttattcc
caagtggagtggcgtcagtcaattgttcttgaaaaatttgagaaatacataagatccttt
ttacccctggcaaagcttgatgaggcgaaggttaacagtctagtaagggacttggttatg
accttcaatttttctccaaacaacatcatctttaaaccaggagaatggaattttgtctcg
cttttagtattaaaaatgctcagtattcgtatccctgccatcaaagctggaatggagatg
gaagacttccagaaattccaaaacacacttctttcaaacttccatctagacttcggttat
cctgatcgttttcttagttttataacagaaataagacacataatcaggcgacaagttgtc
agcaatgctcagagcaatccagaagatcttgttcagaatttcaacaaagttaatgtaaca
ggtgatgcaaagacaactgaaagcaaggatcagacttaa
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