Macrobrachium rosenbergii (giant freshwater prawn): 136847293
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Entry
136847293 CDS
T10429
Name
(RefSeq) collagen alpha-5(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj04512
ECM-receptor interaction
mrj04820
Cytoskeleton in muscle cells
Brite
Exosome [BR:
mrj04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
136847293
Glycosaminoglycan binding proteins [BR:
mrj00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
136847293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136847293
NCBI-ProteinID:
XP_066974939
LinkDB
All DBs
Position
2:complement(55580912..55656952)
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AA seq
1738 aa
AA seq
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MEDQRTSSKRILSVLLTLFWCHASLANKACLNCYTCICEGQKGLLGAPGIPGLQGSAGIP
GDPGVEGPAGPVGRIGDFGEPGAMGEKGYRGDMGMPGFQGTAGIPGLPGLEGPAGEPGPP
GCNGTDGRSGLPGLPGQPGLRGPPGPDGARGPVGDTGEGGTNSRGVKGDQGEPGYPGRPG
YGGTSGPQGTRGDQGIPGLKGLRGDKGYQGPPGERGDTPPPLPPVTVRGEKGQKGEPSGI
KFKKPPSEIDLMGSKGDSGFPGPAGIPGSTGGPGYIGKLGEKGMKGEIGKDGQKGKPGRQ
GQRGPPGEKGFKGAPGFAGYPGPKGPKGYEGVPGFDGQTGLVGEPGPEGMSDLADTVQYI
GPPGPQGPPGLPGFPGPDGLNGRPGGLGLRGPPGSPGPAGSDGQNGDRGRSQPGEDGDAG
FDGLIGKPGRRGPRGPGGFPGVKGIPGDSVFGSKGLDGRNGRPGSNGIPGARGFSGPKGL
KGLPGEGVPTRGPKGPKGLRGPPGEPGLMGPNGRNGIPGSKGTEGDTCIPSPRDPCESGD
LGIPGPQGIQGRSGPPGLPGPRGPKGVPGNSGLPGLRGIDGFRGTPGANGRAGRKGDVGE
LVPSLSSRGRYGSDGEVGIPGLAGLKGERGPDGAMGRVGLEGIKGDQGNDGIPGNPGRPG
LDGPRGQDGFPIHGLPGKSGIKGEQGEPGLRGPPGEILFPGGANVTEFIKGKRGPQGLIG
EVGERGDPGDPGYHGDPGPPGPPGFSEQGPRGLKGYPGPKGEMGHAGQQGFNGDDGTPGL
DGIPGLKGEEGEDGISGLTGPNGEPGIFGSKGEPGFDGKQGLKGYLGLPGLPGLKGAKGA
PGNLGIPGPKGIQGIAGERLPGQPGVAGRPGVPGFPGPLGSPGGQGRPGIPGPSGASGTK
GNIGFVGAPGEPGNLGLDGTPGSPGRPGSGGFPGRPGLKGGRGVPGNPGNPGNPGAFGRP
GPPGLVGDPGRGGNIGFEGNPGPKGPRGFPGEVGFRGPPGDNGTHFGHGDFGFPGEPGDP
GRNGFPGTLGSLGIPGIDGRGIPGPKGRIGPIGLRGTNGLQGRQGTKGESGLMGIPGTRG
EPGEPGTLGLPGPHGGTLVGPAGAEGLPGIKGTPGEPGRFGNRGLPGDVGAPGLPGKLGP
PGLRGQDGDRGPQGISFGATKGEPGLPGFAGDRGANGLPGIQGIKGEIGNQGLAGFIGRP
GLPGQRGDPGSRGLIGPPGLPSRKGEPGETGMEGRPGKVGQPGRHGQKGQPGDFGPDGPA
GSKGLPGLSSPRLNGDPGDSGFPGPPGRNGIPGLAGRRGPVGDPGFRSGFPGEPGFPGLP
GLKGLPGEPGPRGFTQPPGDRGLKGSQGEPGFIGLQGLAGDIGDAGDPGRSGIPGAFGLK
GTPGSPGRIGSPGFPGPPGLRGDVGNPGGLGPSGFMGKPGRDGLKGRKGAIGDAGRPGPT
GQPGPRGIRGDRGFDGRSGTPGKPGLDGSPGVPAPPGPPPKSRGYMVTRHSQESFTPSCP
AGTNVMWEGYSLLHVMGNHRAHGQDLGAPGSCLRRFSTMPYLFCNLNNVCDYSQRNDYSY
WLSTTEPMPMMMTPITGPDIEKYISKCVVCEAPSLVIAVHSQTLDIPDCPPGWESLWIGY
SFIMHTDSGAEGSGQSLISPGSCLEDFRASPFIECTGHGRCNLFPSAFSYWLATIEIEQQ
FRKPRQQTLKAGDLKTRVSRCNTCMRKRGGSPIPTPPPEYEQPPFPRREDDSYFFIGK
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atggaagaccaaaggacgtcttccaaacgaattttatcggtccttttaacgttattttgg
tgccatgcgtcattagcgaataaggcttgtctgaactgctatacatgcatatgcgagggc
caaaaggggctcttgggagcccctggtatccctggtcttcagggttcagccggcatacca
ggagaccccggagttgaaggacctgcaggccccgtcggcagaattggtgactttggggag
cccggagcgatgggagagaagggctatcgaggtgatatgggcatgccagggtttcagggc
acggctggtatcccgggtcttccagggttggaaggtcctgcaggcgaacccgggccgcct
ggttgcaacggcacggacggccgttctggtttgcctggtcttcctggacagccaggtctc
agaggtcctccaggccccgacggtgcccgaggacctgtaggagacacgggcgaaggaggt
acaaattcccgaggtgtcaagggtgaccaaggagagccgggttatcccgggaggcctgga
tatgggggtacctctggaccccaggggactagaggtgatcaaggaataccaggtcttaag
ggcttacgaggtgacaaaggataccaaggccccccaggagaaaggggtgacactcctcca
ccactcccacctgttactgtcagaggagagaaagggcagaaaggagaaccttctggcata
aagttcaagaaacctccatctgaaattgacctgatgggaagtaaaggggactcaggtttt
cctggtccagctggcatacctggaagcactggaggaccaggttacattggcaagcttgga
gaaaaaggtatgaaaggagaaataggtaaagacggtcaaaagggaaagccaggacgtcag
ggtcaacgaggaccccctggtgaaaaaggcttcaagggagcacctggatttgctggatat
cctggccctaaaggtcctaagggttatgaaggtgtacctggttttgatggtcaaactggt
ctagtaggagagccaggtcctgaaggaatgagtgatcttgccgacactgtccagtatata
ggacctcctggaccacaaggtcctcctggattgccaggttttccaggtcctgatggttta
aatggtcgacctggaggcttagggctacgtggtcctccaggttctccaggaccagctgga
tctgatggccaaaatggtgatcgtggacgctcacagcctggtgaagatggtgatgctggt
tttgatggactaatagggaagccaggaaggcgtggcccaaggggtccaggaggattccca
ggtgttaagggcatccctggtgattctgtgtttggaagcaaaggattagatggacgtaat
ggaaggccaggcagcaatggtattcctggagccagaggattttctggtcctaaaggcctt
aagggtttgcctggtgagggagttcctactcggggcccaaaaggaccaaaaggtcttcgt
gggccaccaggagagccaggattaatgggccccaatggccggaatggtatcccaggtagc
aaagggacagaaggagatacctgcattccttctccaagagatccatgtgaaagtggtgat
cttggaattcccggtcctcagggtattcaaggccgttcaggtcctccaggtcttcctggt
ccccgaggtccaaaaggagtcccaggaaattcaggtctccctggtttgcgaggcattgat
ggatttagaggaactcctggtgctaatggaagggctggcaggaagggtgatgttggggag
cttgtaccaagtctaagtagcagaggtcgatatggaagtgatggtgaagtgggaatacca
ggtcttgctggtctaaaaggagaaagagggccggatggtgcaatggggagagttggacta
gaaggtattaagggtgatcaaggaaatgatggaattcctgggaatcctggtaggcctgga
ttagatggaccgcgtggacaggatggtttcccaatacacggcctccctggcaaaagtgga
attaaaggagagcaaggagaacctggacttcgtggtccacctggtgaaattttatttcct
ggtggagcaaacgtgacagagttcatcaaaggcaagcgaggacctcaaggtctaataggt
gaggtaggtgaaaggggtgacccaggtgacccaggttaccatggggatcctggtcctccc
ggacccccagggtttagtgaacaggggccaagaggcttaaaaggatatcctggaccaaag
ggagaaatgggacatgctggacagcaagggttcaatggtgacgatggaactccaggactg
gatggtatacctggcttgaaaggtgaagagggagaggatgggattagtggactcacaggc
cctaatggagaacctggcatttttggtagtaagggtgaaccaggatttgatggtaaacaa
ggcttgaaaggctatcttggtttacctggtcttccaggtttaaaaggtgccaaaggtgct
cctgggaatctaggcatcccaggaccaaagggtattcaaggtatagctggtgaaagactt
cctggacagcctggtgttgctggacgtccaggagttcctggttttcctggtcctcttggt
agtcctggtggccaaggacgtcctggtataccaggtccaagtggagcttctggaactaag
ggaaacatagggtttgtaggagcacctggtgaaccgggtaatctaggtttagatggtaca
ccaggatctccaggaaggccaggcagtggtggattcccagggcgccctggcttaaaagga
ggaaggggagtcccaggtaaccctggaaatcctggtaaccctggtgcatttggacgccct
ggaccacctggcctcgtaggagacccgggtcgtggcggaaatattggttttgaaggcaac
ccaggaccaaaaggccctcgtggttttccaggtgaagtaggttttaggggaccacctgga
gacaatggaactcattttggtcatggtgattttggttttccaggtgagcctggtgaccct
ggtagaaatggatttccaggtactttgggctcacttggaatacctggaatagacggacga
ggaattccaggacccaagggtcgaattggtcccattggtcttcgtggcaccaatggactt
caaggaaggcagggcacaaagggagaatcaggtctgatgggcataccaggaacaagggga
gaacctggtgaacctggaactcttggactacctggaccacatggtggaacacttgttggt
cctgctggtgctgaaggtttaccaggaatcaaaggaacacctggagagcctggcagattt
ggcaaccgtggtttacctggagatgtaggagcccctggtcttcctggcaaacttggtccc
cctgggttacgaggtcaagatggtgaccgaggtcctcagggcataagctttggtgctaca
aaaggagaacctggattacctggttttgctggagacagaggggccaatggtcttccaggt
attcagggaattaagggtgaaattggaaaccaaggacttgcaggtttcattggccgtcca
gggcttcctggacaaaggggtgatcctggaagtaggggattaattggtcctccagggtta
ccaagcagaaaaggagagccgggtgaaacgggaatggaaggtcgtcctggaaaagttggt
caaccaggccgccatggccagaagggtcagcctggagactttggccctgatggaccagct
ggcagtaagggtctgccaggattaagctctccaagattgaacggtgatcctggggattct
ggtttccctggtcctcctggaagaaatggtatccctggtttggcaggacgacgaggacca
gtaggtgatccaggatttagaagtgggttcccaggtgagcctgggtttcctggtctacct
ggtttgaagggacttcctggtgaacccgggccacgtggttttactcaaccccctggtgat
agaggattgaaaggatctcagggtgaaccaggatttattggacttcaaggacttgcaggt
gatattggggatgctggagatccaggtcgatctggtattcctggggctttcggattgaag
ggtacccctggatccccaggtagaataggaagtccaggtttccctggccctccaggtcta
cgaggtgatgttggtaaccctggtggtcttggaccttctggatttatgggtaagcctggg
cgtgatggattgaagggaagaaaaggtgctattggtgatgcaggtagaccagggcctact
gggcagccaggacccagaggtattagaggtgatcgtggatttgatggtcgaagtggtact
cctggaaaaccaggactggatggctcaccaggtgtcccagctccacctggtccaccacca
aagtcaaggggttacatggtcactcgccattctcaagaatctttcacaccatcttgtcca
gctggtacaaatgtgatgtgggaaggttactctcttctacatgtgatgggtaatcacaga
gcccatggtcaggaccttggggctcctggcagttgccttaggagattcagcactatgcca
tacctcttctgtaacttgaataacgtgtgcgattactcgcaaagaaatgattactcctac
tggctttcaacaacagaacccatgccaatgatgatgacaccaattacaggaccagatatt
gaaaaatatatatctaagtgcgttgtatgtgaagctccgtcactggtgattgcagttcac
agtcaaacacttgatattcctgattgtccaccaggctgggagtcactctggattggatat
tcatttatcatgcacactgactcaggagctgaaggttcagggcagtcattaatctcgcca
ggatcttgtctggaagatttcagggctagtccattcattgagtgcactggccatggtcga
tgtaatttattcccctctgcattctcctattggcttgccaccattgaaattgagcagcag
ttcagaaagccaagacaacaaacacttaaagccggggacctaaaaactagagttagtcgc
tgtaacacctgcatgagaaagagaggtggtagtccaatacctactccaccacccgagtat
gaacagcctccatttccacgcagagaggatgattcatacttcttcattggtaaataa
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