Macrobrachium rosenbergii (giant freshwater prawn): 136847657
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Entry
136847657 CDS
T10429
Name
(RefSeq) nuclear pore complex protein Nup54-like
KO
K14308
nuclear pore complex protein Nup54
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136847657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrj03019
]
136847657
Messenger RNA biogenesis [BR:
mrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
136847657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
YfdX
Nup54_C
Motif
Other DBs
NCBI-GeneID:
136847657
NCBI-ProteinID:
XP_066975557
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Position
17:2146088..2179912
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AA seq
553 aa
AA seq
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MTTSGFTFSTPSASGSAAQAGGFSFGGPSFGSTTAPGTSTGTTGFSFGGTGTGGPATSST
GFSFGGTGTGGPATSSTGFTFGSGTSGTTTAAAPFGSTFGTGTSSAGQGFPFGTGTSQAN
KPAFGFGFGNPPASGGSNFLLGSSFGAKPNTGFGTQGADASQQLQFNTGQPDQSLALHLA
ICAPSYFNNENDEVLRKWNQLQAFWGAGKGYYAQNMPPIEFTPENPYCRFKTVCYAKIPN
FKNEDGIVHVVIGKSISDVEPHKSQIISTLSSSVFNGAEVVVDDVYASELPDKTNLRMYV
QQHGGSGEKQRAPATEVCRHMGLPSYSQTMKNLCIQDVLPLQAMSEVQKKEYLDTPQRGI
DPALWEQGKRENPDPKNFLPVVRIGFQELQKQFKYQEEFAKSLHASMDNILDEIAQLKHK
QTIVKAAIQNAKWKQSNLTRRILKLVSAQEVERKRGVPLDQTEEQIRMRLEDLYLQLMQP
TQYRGCLNELMAQMSVKPGNSRGNPRYGLVGDKEKDITHYIAKQQDALQAVVGVLKDDMQ
TVDNIVEEIQRKG
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaagtggatttacctttagtacaccaagtgcaagtggatctgctgcacaagct
gggggatttagctttggtgggcccagttttggcagtaccactgcgcctggaacatcaact
ggcacaacaggatttagctttgggggaactggaacgggtgggcctgctacaagctcaaca
ggatttagcttcggaggaacgggaacaggtggacctgccacaagctcaacaggatttacg
tttggaagtggaacatcgggaacaactacagctgctgctccttttggctctacatttggc
acagggactagcagtgctggtcaaggtttcccttttggcacaggtacaagtcaggcaaat
aaaccagcatttgggtttggttttggaaatccaccagcaagtggtggatctaattttctt
cttgggtcgtcatttggagcaaaaccaaacactggatttggaacccaaggagcagatgca
agccagcaacttcaatttaacactggacagcctgaccagtctttggctctacatttagcc
atttgtgctccatcgtatttcaacaatgagaacgacgaagtgctacggaaatggaatcaa
ctccaagcattttggggagccggaaaaggatattatgcccagaatatgcctcccatagaa
tttactccagaaaacccgtattgtcgattcaagactgtttgttatgccaagattccaaat
ttcaaaaatgaggatgggattgttcatgtggtcattggaaaatcaatttctgatgttgaa
ccccacaaaagtcagattatctcaaccctttcatcatctgttttcaatggagcagaagtt
gttgttgatgatgtgtatgcgagtgagttacctgataaaacaaatcttaggatgtatgta
cagcagcatggaggaagtggagagaagcaaagagcacctgctactgaagtttgtcgccac
atgggacttccgtcatattctcagaccatgaagaatttgtgtatccaagatgttttacct
ctgcaagcaatgtctgaagtgcagaagaaagaatacctggatacaccacaaagaggaatt
gatccagcactttgggagcagggaaaaagagagaatccagatcctaagaatttcctccca
gttgtcagaataggattccaagaacttcaaaagcagttcaagtatcaagaggagtttgcg
aaaagtcttcatgctagcatggataacatcctggatgaaattgcccagttgaaacacaag
caaacaatagttaaagcagcaatacagaatgctaaatggaagcagtctaatcttactcgt
agaatattaaagcttgtttcagcgcaagaagtagaaagaaagcgtggagttccattagat
cagacagaagaacaaattcgtatgagattagaggatttatatctgcagttaatgcaacct
acacaatacaggggctgcctgaatgaactcatggcgcagatgtctgtcaaaccaggaaac
tcgagaggaaatccacgctatggtttggttggggacaaagaaaaggacataacacactat
attgcaaaacaacaagatgcccttcaggctgttgtaggcgtactgaaagacgatatgcaa
actgtagacaatattgttgaggaaattcaacggaaaggctaa
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