Macrobrachium rosenbergii (giant freshwater prawn): 136848570
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Entry
136848570 CDS
T10429
Name
(RefSeq) SWI/SNF complex subunit SMARCC2-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
136848570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrj03021
]
136848570
03036 Chromosome and associated proteins [BR:
mrj03036
]
136848570
Transcription machinery [BR:
mrj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
136848570
Chromosome and associated proteins [BR:
mrj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
136848570
PBAF complex
136848570
GBAF(ncBAF) complex
136848570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_1
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
Motif
Other DBs
NCBI-GeneID:
136848570
NCBI-ProteinID:
XP_066976959
LinkDB
All DBs
Position
19:3970296..4001240
Genome browser
AA seq
944 aa
AA seq
DB search
MAINPRKDGGPNAKYYESTETVSQFENVKTWLMKNAKKYVAADPPNNKGLAQLVVQLLQF
MEDNFGPKVTKAPMTKLPMKCFLDFKPGGGLCHILSTVYKFKSDQGWRRFDFQSPSRKDT
NIELFKEIEKSLLSNKCWAKPSVFIHGEVDKELRNELKDIVKRHDGKIVEEEEEASHVVF
DEQDPLDDEFARAVMRRDRQILFHFYYMPDSYDSWASGVELDYDPPESPQFFDGQWKVCA
NWLQDLESYNEWMNEEDYEVDDNGTKKKHRGCLSVDDTMGLSDPDKKKKAKKRPRSPPSP
RTKRKGARGAATPGKPVKKIKTDEEEEDLTRDMEDPVAEPTVTEVTTSSKIQPSKAGTYM
DLDEESAEKTEKPEGQMHVFNLQPTPDGEDTATDQTHHIIVPSYAAWFDYNAIHAIEKRG
LPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAVMRVHAFLE
QWGLINYQVDADARPTPMGPPPTSHFHVLADTPAGLQSINPPKVNQPSAAKQLMDFEKKP
TDKKPEINIGTEFGLKLDQYSKKTGALKNKSAASQAREWTEQEILLLLEALEMYKDDWNK
VCEHVGTRTQDECILQFLRLPIEDPYLEDPEVGNGPTASALGPLAYQPIPFSKSGNPIMS
TVAFLASVVDPRIAASAAKAAMDEFCRIKDEVPAALLDSHIKNVADHAASNEGKVDPTAG
LAKSGIAGTEPEGEEKKDSEGEGEKKETEPKKDAEKKEEEKKEEKEPEKKEEPMEVDKAS
EEKTEEKKEGTEDEEKKEEKETKEDKKEENTEEKKLDAERERLRKDASVQQAASAALGSA
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDRERESLELQRQQLLQ
ERQQFHLEQLKAAEMRARQHALHQLTQGASPAHSPAPSLTQVHN
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggccataaatcctcgtaaggatggcggtcccaacgccaagtattacgagtcgacggag
acggtgtcgcagttcgaaaacgtgaagacatggctgatgaagaacgccaaaaagtatgtg
gcagcagatcccccaaataacaaaggcttggctcagcttgtggtccagctgttacagttt
atggaagataactttggtcctaaagtcacaaaggctcccatgaccaaattacctatgaag
tgcttcctagactttaaaccaggtggcggcttgtgtcatatacttagcactgtgtacaaa
ttcaagagtgaccagggatggcgcaggtttgattttcagtctccgtcccgcaaagacacc
aacattgagctcttcaaagaaattgagaaatcattgctctccaacaaatgctgggcaaag
ccatccgtattcatccacggggaagtggacaaggaattacgtaatgagctgaaagacatt
gtgaagcggcatgatggaaaaattgttgaggaggaagaagaggcatcacacgttgttttt
gatgaacaagaccctcttgatgatgaatttgccagagcagtcatgaggcgggatagacag
atactctttcatttctattacatgccagattcctatgattcttgggcttcaggagttgag
ttggattatgatcctcccgaatctccacagttctttgatggccagtggaaggtttgtgct
aactggttacaagatttggaatcttacaatgaatggatgaacgaggaagactacgaggtt
gatgataacggaacgaaaaagaagcaccgtgggtgtctgagtgtagacgacacaatgggc
ttgagtgatccagataaaaagaaaaaggcaaagaagagaccaagatcaccgccatctcct
cgtacaaagagaaagggtgctcgtggtgcagctactcctggtaaacctgtcaagaagata
aaaactgatgaagaggaagaagatttgacgagggacatggaagacccagttgcagaaccg
acagttaccgaggtgacaacaagctccaagattcagcccagcaaagctggcacatacatg
gatctagatgaagaaagtgcggagaagacagaaaaaccagagggacagatgcatgttttc
aacttgcagccaactccggatggggaggacacagcaacagatcagacgcatcatatcatt
gtaccgagttacgctgcctggtttgactacaatgctatacatgccattgagaagagaggg
ttgccagagtttttcaatggaaagaacaagtctaaaacgcctgaaatttatcttgcttac
agaaatttcatgattgacacctacagattgaatccaacagagtacctgacatccactgca
tgcaggcgcaacttggcaggtgatgtgtgtgctgtcatgcgtgtacatgcattccttgag
cagtggggattaataaactaccaggttgatgcggatgccagaccaactcccatgggccca
ccacctacatctcacttccacgttttggctgatactcctgcagggctacagtcaatcaat
cctcctaaggtaaaccagccatctgccgctaaacagctcatggactttgaaaagaagcca
actgataagaaaccagaaatcaacataggaactgaatttggtctcaagttggatcagtat
tcaaagaagacaggtgcactgaaaaataagtcggcagcgagtcaggcacgagaatggact
gaacaagaaattctgcttttactagaagcacttgagatgtacaaagatgattggaataag
gtttgtgaacatgtgggcacaaggacacaagatgagtgcattctgcagttcctgagacta
cccatagaggatccttacttagaagaccccgaggttggtaatggtccaactgcatctgca
ctaggtcctcttgcgtatcaacctattccattcagtaaatccggtaatccaataatgtct
acagtcgccttcctagcctcagtggtggatcctcgcattgccgcgtctgccgccaaagct
gctatggatgagttctgtcgtattaaggatgaagttccggcggcgctacttgattcccac
atcaaaaatgttgccgatcacgctgcatccaacgaaggaaaggttgatccgactgctgga
ttggcaaaatcgggcattgctggaactgaacctgaaggagaggaaaagaaagatagcgag
ggagagggcgaaaagaaagaaacagagcctaagaaggatgcagaaaagaaagaagaagaa
aagaaggaagaaaaggaaccagaaaagaaagaagagcccatggaggtggacaaagcatct
gaagaaaagacggaggagaagaaagagggaacagaggatgaggaaaagaaagaggagaaa
gaaactaaggaggataaaaaggaagagaatacagaggaaaagaaattggatgcagaaagg
gaaagacttcgcaaggacgcttcagtgcagcaagcagctagtgccgccctcggctcggca
gctgtcaaagcaaagcatttggccgccgtagaggaacgtaagatcaagtcacttgtcgct
ctcctggttgaaacacagatgaagaaattagaaatcaagttacgtcactttgaggaactt
gaaacgatcatggacagagagcgagagagtttagagcttcagcgacagcagttactgcaa
gaacgtcaacagttccatctcgaacaactgaaagcagccgaaatgagagctcgtcagcat
gcattacatcagttaactcagggtgcgagtccagcacactccccagcgccgtctttgaca
caagttcacaattag
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