Macrobrachium rosenbergii (giant freshwater prawn): 136849014
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Entry
136849014 CDS
T10429
Name
(RefSeq) LOW QUALITY PROTEIN: cytoplasmic dynein 2 intermediate chain 1-like
KO
K22869
WD repeat-containing protein 60
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mrj03037
]
136849014
Cilium and associated proteins [BR:
mrj03037
]
Primary cilia and associated proteins
Dynein and associated proteins
136849014
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
DUF6986
Motif
Other DBs
NCBI-GeneID:
136849014
NCBI-ProteinID:
XP_066977958
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Position
20:5546850..5596020
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AA seq
1208 aa
AA seq
DB search
MKDREKAPRPSRSSVDGAEKSKPKASSRAQPTKSGPSKSSSSGASKKPTTSSSKSSTATK
SQSSSRTPKAAASTSSSKSRSTVELKPEKPSSKPGASSSKDERAKRTSSKKSNEVQGSKE
SEKNDRTSIKKDKAPSRSSREPGKGDKGPSRKTEKDSSTSLGNKPSSRSKGESKERSEKK
PPREDKSSKSQGKSKDRGRAPESEKGERAPSNRRVVRDEKPSSKSSKDSNKTKSSDKSDA
KKSSQNESEKVKDRSKSAKGEKIEKSKEDSSKQKSSRSREKSAKRSLSQKEESLIEDRDS
GVEGLGIQGSVIGHSPKGQLEAEVVEHNQNSLETMESGISLSTPRDLSGDEAEVEESISS
KMVEVDEVPEEGLQDDEDEAMIDDSVSPVDFLDETFPADLQYRNPVDIPASLVSHSDIAK
DNGNIETEVIEETEEQLEGDNDVGVSNENGTEEPDVEEEYYEEDFEDYESDFEDDTGSGN
EDEEESEESASTAEASSSGSALSSSAEDSDDEIKDPDLEAVLQAMARENNFTYPLERVNT
FDDPTQDERPVPSGEEGKQSVAQEAASKATNKEKQNTTTQRPKTSRTFVNFAVAKKKQEA
AHINSKMNSRGRILLSMIQLDTVNVDVLTLAPVSYEAYISSFGHSNRQQVNVQTNEDALS
EEIQTEPVEMRNKWTQKPVHISIGKDDELPGPEDYMGVGGDMGPLTFSGAATGKSSTSRL
TSFLTSASQVMLALLEEELVWETXAESNKSDSSATSEGLGFSQPPVTLGQNVQSLLEGRT
TPFVKFCPSEPNLLLSGHGFHSLGEENIEDFKDGGLLCVWWVQEPSRPQHLLSCCSTPTA
ASFSPARPSLIIAGLEDGSLSTWDLRESLQLHTLKINIDEDHWRVRVPSYITACDESGEG
EGSPIVAIHTVTTEEDQMSDTHGAFQVVTLTANGRVTWWVVMHVPLTSAMGDINFGRKSA
TVRTISSNVAVSPHLGASPWARIVINRAATINVADTLYGDEAISNEIICHDLKMDMNDSS
QLYVATGSGAVAHCSRHSSRIHPKAYYPEFEPGCESLCIALCPHDYRYMLVGSSDGMVRL
HSISSERPLTTWQSAPDCAPVKGLQWSPARPCVFYVLDSMARLHIWDLSAGDIFPMLTVE
AGGLVGGALRSFNIAPTNPTSRHPLYAVFASDGGEMVLRQVGPEFSTHHLQDDYDTELER
FTYYVNII
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacagagaaaaggcaccaaggccttcaagatcttcagttgatggtgctgagaaa
tcaaagcccaaagcttcttctagagcacagccaacaaaatctggtccatcaaagtcttca
tcttcaggtgcttctaaaaaacctacaacctcaagctctaaatcatccactgcaaccaag
tctcagtcatcttcccgaactccaaaggctgctgcctccacttcatcttctaagtctcgt
tcaacagttgaactaaaaccagaaaaaccatcatctaagccaggtgctagcagcagcaag
gatgagagagcaaagcgaactagtagtaagaaatccaatgaagtacaagggtctaaagaa
tctgagaagaatgacagaacatccatcaaaaaagacaaagcaccaagtcgtagtagtaga
gagcctggtaaaggagacaaaggccccagcagaaaaactgaaaaagattcatccactagt
ctcggcaacaaaccatcaagtcggagtaaaggagaaagtaaggagagatctgagaagaaa
cctccaagggaagacaaatcctcaaaaagtcaaggaaaaagcaaggaccgtggcagggca
cctgaaagtgaaaaaggtgagcgtgccccatctaacagacgtgtggtaagggatgaaaag
ccatcaagtaagagtagtaaagactcaaataaaacaaagtcatctgacaaatcagatgcc
aaaaaatcatcccaaaatgaaagtgaaaaagttaaagacagaagcaagtcagctaaagga
gaaaagattgaaaaatcaaaggaagacagctctaaacagaaaagttcaaggtctagagaa
aaatctgccaagcgcagcttatctcaaaaagaagagtctttaatagaagacagagattca
ggtgttgagggtcttggcattcaagggtcggttattggacacagccccaaggggcagctg
gaggctgaggttgtggaacataatcagaatagccttgaaactatggaatcaggaatttct
ctctcaactcctagagacttaagtggtgatgaagcggaagttgaagaatccatatcatcc
aagatggtagaggttgatgaggtgccagaagagggtctgcaggatgatgaagacgaagct
atgattgatgacagtgtatctccagttgattttctagatgaaacattccctgctgatttg
cagtatcggaaccctgtggatatacctgcttcccttgtttcacacagtgatatagctaaa
gataatggcaatatagaaacagaagttattgaagaaactgaagaacaacttgagggtgac
aacgatgttggggtgtctaatgaaaatggtactgaggaacctgatgttgaagaggagtat
tatgaagaagattttgaggattatgaatcagactttgaagatgatacaggttctggcaat
gaagatgaagaagaatcagaggaatctgcctcaacagcagaagcatcatcttcaggctca
gcattgtcatcatcagctgaagatagtgatgatgaaattaaagaccctgatttagaggca
gtccttcaagccatggcaagagaaaataatttcacttaccctttggaacgtgtgaataca
tttgatgaccccacacaagatgaaagaccagtaccttctggggaggaaggaaagcaaagt
gtggcgcaagaagcagcatctaaagcaaccaacaaggaaaaacagaacaccactactcag
agaccaaaaacatctcgcacttttgtcaattttgctgtggcgaagaaaaagcaagaggca
gcacatataaactcaaaaatgaatagccgaggtcgtattttactgagtatgatccagctt
gatacagttaatgtagatgtactgacattagcaccagtgtcatatgaagcctatatatcc
agctttggacattcaaacagacagcaggttaatgttcagacaaacgaagatgctctgagt
gaagaaatccagacagaacctgtagaaatgcgtaataaatggactcagaagcctgtacac
attagtattgggaaagatgatgagttaccaggacctgaagattatatgggagttggagga
gatatgggcccattaactttttcaggagcagcaacgggaaaatctagcacttctcgtctc
acttctttccttacatcggcatctcaggtgatgttagctcttttagaagaggagttagta
tgggaaactnnggcagaatcaaacaaatctgactcatcagcaacatcagaaggactagga
ttttcacaacctcctgttactctgggacaaaatgttcaatctcttttggaaggccgaaca
acaccctttgtcaagttctgcccaagtgaaccaaacttattactttctgggcatgggttt
cattctttgggggaggaaaatattgaggactttaaagatggtggacttttgtgtgtatgg
tgggtacaggagccatccagaccacagcaccttctgtcatgctgttcaacccccactgca
gcttcattcagtcctgctaggccttctctgataatagcaggacttgaggatggctctctt
tccacttgggatttaagagaatcactgcagttacatacactgaagataaacattgatgaa
gaccactggagagtgagggttccatcctacattacagcctgtgatgaaagtggagaagga
gaaggcagtcccatagtggccattcatacagtcacaacagaggaagatcagatgtcagat
acccatggagcttttcaggtcgtaacactaactgcaaatggccgtgtgacttggtgggtt
gtaatgcatgttccattaacaagtgcgatgggtgatattaactttggaagaaagtctgcc
acagttagaactatcagtagtaacgtagcagtatcaccacatttgggtgcttcaccttgg
gccagaattgtaataaatcgtgctgctacaatcaatgttgctgatacactgtatggagac
gaagcaatatcaaatgaaattatttgtcatgatctgaagatggatatgaatgattctagt
caactttatgttgcaactggaagtggagcagttgcacattgttctcgtcactcctctaga
atacacccaaaggcatattatccagaatttgaacctggatgtgaatctttgtgtattgct
ttgtgccctcacgattatcggtacatgttggttggaagcagtgatggtatggtcaggctt
catagcatatcttcagagagacccttaactacctggcagtcagctccagactgtgctcca
gtaaaagggttacagtggtcacctgctcggccttgtgtgttttatgtgctggactcaatg
gcaagactccatatatgggatttaagtgctggtgacatcttcccaatgttgacagtagaa
gctggaggattagtgggaggagctttacgttcatttaatattgctcctacgaacccaaca
tctcgtcatcccttgtatgcagtatttgcaagtgatggtggagaaatggtcctcagacaa
gttggtcccgaattttctactcatcatttgcaagatgattacgatacagaactggaaaga
tttacctattatgtaaatataatctga
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