Macrobrachium rosenbergii (giant freshwater prawn): 136849121
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Entry
136849121 CDS
T10429
Symbol
Ku80
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
136849121 (Ku80)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrj03400
]
136849121 (Ku80)
DNA repair and recombination proteins [BR:
mrj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
136849121 (Ku80)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
Motif
Other DBs
NCBI-GeneID:
136849121
NCBI-ProteinID:
XP_066978199
LinkDB
All DBs
Position
20:complement(20186526..20298549)
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AA seq
737 aa
AA seq
DB search
MPPRAKPGEGIALVLDVSPHVRAGVDETFFSLSKKCLINILQRKMFAEKCRDEVAIILLG
SDETDNSLATPDQYQNIKVLQEPRLVSWDIINEVERITGGKKSGDWLDALVVAMDLLHDP
DEVRFSGKKIVLFTDFSSEFSDDQTSAIVAGLCNQGISLNIIGPEILDDSADDSGDVDGP
GPSNGLQPFKNGVRTVPKNWNGKPKTAVQLAGEAVATRVVAEADGGMYSFEDAIPQLIFF
EKRSSGSANWNTLLEIGPSFQIAITGRIKIKHSTVPTWKTAYASDESAAIIKETSFHRND
DAQTPVDEDEVIPGYKYGTTLVPYIDEDSQMKYFSNTQRCLSILGFTRRSNVPHQFWAGE
QVLVITGREGDEAAAVALSSFIHALEVLDYVGITRRIYNKNSDPVLGALFPDITKDYECL
IWIPLPFQEDVRSYSFPSLRKTTEKLTESEKQAMDNLITAMDLTVVNEDDGDGSREELLE
PSGVLNPQLQHYCNALTHRAIHEYDPIPAPVDHVINILKPPEEIIDGRDECAKELVTLFP
TKKIVKKSKRDSGDLFASTEEESNKKLKSDDGDDTLTSSDLTRALVTKITTASPTEDFYA
LLKGEAPNFTLICSQMRDIILQLVDSWSQGSTSSEVLLSRVIDCLTAFRKESSLIDPSLY
NDLMPPLKSAVISGSIQQLWDRVKEGNLGLVTTEESLKSSVSKAAASAFLELEAEPQQEV
SEPKQEEDDVEDLLDDL
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgccaccgagagccaaacccggggagggcattgctcttgtgctggatgtcagtcctcac
gtccgagcaggtgttgatgaaaccttcttttccctctcaaagaaatgtttaataaatatc
ttacaacgtaagatgtttgctgaaaaatgcagagatgaggttgctattatcctcttgggg
tcagatgaaactgataattcactagcaactcctgaccagtatcaaaacattaaagttctg
caagagccacgcctagtttcatgggacataattaatgaagtagaacgcataactggtggg
aaaaaatctggtgattggttagatgctttggttgtggctatggatcttctgcatgatcca
gatgaagtaagattcagtggaaaaaagattgtgctgttcacagacttcagtagtgagttt
agtgatgatcagacgtcagcaatagttgctggcctatgcaatcaaggaatctcgcttaat
ataattggtccggagattttagatgacagtgctgatgatagtggggatgttgatggccct
ggaccaagcaatggattgcagcctttcaaaaatggtgtacgaacagttcctaagaattgg
aatgggaaaccaaagactgctgttcagcttgcaggagaagcagttgcaaccagagtagtt
gcagaggcagatggtggtatgtatagttttgaagatgccattccacaattaattttcttt
gagaaacggtcatctggtagtgccaactggaacactcttttggaaattggtcctagtttc
caaattgccattacagggagaattaagattaaacattctacagttcctacatggaaaaca
gcatatgcatctgatgaaagtgcagccattattaaagaaacttcattccaccgaaacgat
gatgcacaaactcctgtggatgaagatgaggttatcccaggctataaatatggaacaaca
ttggtaccatacatagatgaggactctcagatgaaatacttctccaatacccaaagatgt
ttaagcattcttggctttactcgtagatccaatgttcctcatcagttctgggcaggagaa
caagttcttgttataactggtcgagaaggagatgaggcagcagcagttgctctgtcttcc
tttattcatgctttagaagttcttgattatgtggggattacccgcaggatctacaacaaa
aacagtgaccctgttcttggtgccctctttcctgacattacgaaagattatgagtgcctc
atatggataccattacctttccaagaagatgtcagatcatactcattcccgtctcttcgt
aaaacaacagaaaaattaacagaaagtgaaaaacaagcaatggataatctcataactgct
atggatcttacagtagtgaatgaagatgatggagatggaagtagggaagagttgttggag
ccatcaggagtgttaaacccacagcttcagcattactgtaatgctttaactcacagagca
attcatgaatatgaccccattccagcacctgtggatcatgtcattaatattttaaagcca
ccagaagaaattattgatggaagagatgaatgtgccaaagagttagtcactctattccct
accaagaaaatagtaaagaaaagcaagagagacagtggagacttgtttgcaagtactgag
gaagagagtaacaaaaagctcaagtctgatgatggtgatgacactttgactagcagtgat
ttgactagagcccttgtaacaaaaataaccacagctagtcccactgaagacttttatgca
cttctgaaaggagaggctccaaatttcactttgatttgcagtcagatgagagacatcatt
ctacaattggtagatagctggagtcagggcagtacatccagtgaggttttgttatccagg
gtcatagattgcttgactgcctttagaaaagaatcatccctcattgatccatccctttac
aatgatcttatgcctcctctcaaaagtgctgtcataagtggatctattcaacagttatgg
gacagagttaaagaaggaaaccttggattagtcaccacagaggaaagcttaaaaagttct
gttagtaaggcagctgcaagtgcattccttgaactagaagcagaaccacaacaggaagtt
tcagaaccaaagcaggaggaagatgatgttgaggatttactcgatgacctgtaa
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