Macrobrachium rosenbergii (giant freshwater prawn): 136849227
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Entry
136849227 CDS
T10429
Name
(RefSeq) DNA mismatch repair protein Msh3-like
KO
K08736
DNA mismatch repair protein MSH3
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03430
Mismatch repair
Brite
DNA repair and recombination proteins [BR:
mrj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
136849227
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136849227
NCBI-ProteinID:
XP_066978541
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Position
20:33255576..33350784
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AA seq
1057 aa
AA seq
DB search
MSSSAKKQLTISKFFAPVRKKGGPDFETDEEVEIKNKRSNQVTAPLKRAKSIDVASVDLS
PKTKKARKNEEEIQESPGSENSEDQAWTSLSPSTKRKLEAFSAGSVKGMNMEESDEEEMP
VNINNGTSTSSVKNRLEGFRSPKASESRTITSQPSENSKKVGLMEPLPGMKLTPLEQQVV
AIKNKYPDTLLFIECGYKYRFFGNDAETAAKELNIIAHLDHNFMTASIPTHRLHVHVRRL
VAKGHKVGVVKQTETAAIKAAGSNKNAPFVRELSALYTRSTLIGEDVSPSGGVNEVTGDD
MTENVTTMLLVLKEDKSSVGKESMTSISIVAIQPSTGDIIYDTFEDSTTRSELWCHLDHI
QPVEALIAEDTSSLTVQTITAASVRSEDRIRIERLTSEKFDYSDALRRVCEMFEGEEGKV
KHITSLPSSVVGCIGATLEYLKEFKLDRIVKMAGTIQPYSLKKHYMRLSGATVRNLEVLA
NGVDGGVKGSLFWALDKTQTKFGSRLLRRWIVQPLLNLEEIKERQDMIEDIMNSDSPVYT
TLRNVLYKLPDFERALTTIFHKKCSPHEFWIAVNGLSQVHAKLSRVSGNLTDNVRAPAMR
NLIEEVLDGLSDIQAYASNINESSAKEGKKTTLFKSFSLFPKVIEKQEAIKQVEKELDAH
RSDIGKVLRLPGFKYTTVSGLEYLVEVKNAQLKAVPKDWNKINTTKACCRFRPPEVEKLF
TKLQILREELQAECHLAWLQVLDSFSEHYQQHRQAVRFLATIDVLIALASVAKSHGFCRP
KIHASDGENCGFLHISGGKHPVISQLKYGEEQYVSNDTNLKGDGQRVMLVTGPNMGGKSC
YMRQVALIALMSQIGSYVPADNVEMSVLDAIYTRMGAADEIYSGRSTFMVEVGETADIMR
EATCHSLVILDELGRGTSTHDGVAIAMASLDYFLNKVKCLTIFVTHYLPLTEFEVLYPES
VGNFHMAFLVNEEELDGVEVVTFLYQLTAGSAGQSYGLNVARLAKIPPPVLKRASDKSKE
LAKICGMKRKGKELFKKFLSTTESPRSLVQELISSEI
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcctctgcaaaaaagcagcttacaatttcaaaattttttgccccagtaagaaag
aaaggagggccagactttgaaactgatgaagaggtggaaattaaaaataaacgttccaat
caggtaactgctcctttgaagcgtgctaaaagcattgatgttgcaagtgtagatttatca
cccaagaccaagaaagctagaaaaaatgaagaggaaattcaagagtcacctggtagtgaa
aatagtgaagaccaggcctggacgagcctttctccttctaccaaacgtaaactggaagcc
ttttcagctggctctgtaaagggaatgaatatggaagaatctgatgaagaagagatgccg
gttaatataaacaatggtacaagtacatcgtcagtaaaaaacagactggaaggcttcaga
tcacctaaagctagtgaaagcaggacaatcaccagtcagcccagtgagaatagcaaaaaa
gttggactgatggaaccactgcctggtatgaagttgactcctttagaacagcaggttgtt
gctataaagaacaaatatccagatactcttttgttcattgaatgtggatataaatacagg
tttttcgggaatgatgcagaaactgccgctaaggaactgaatattattgctcatcttgac
cataatttcatgacagcaagtattcctactcatagattgcatgttcatgtcagaagactg
gttgctaaaggtcataaagttggagtcgtgaaacagacagagacagctgcaatcaaggca
gctggaagcaacaagaatgcaccattcgttcgtgaattatcagccttatatacacgttca
acactgattggtgaagacgtttcaccttcaggtggtgtgaatgaagtcacaggtgatgat
atgacagaaaatgtaaccaccatgttgctggtactaaaggaagataaaagttctgtggga
aaggaaagcatgacttccatttccattgtggcaatccaacccagtactggtgacattatt
tatgatacttttgaggattctacaacccggtcagaactttggtgccatttggaccatatc
cagcctgtggaagcattgatagctgaggatacatcaagtctcactgtccagacaataaca
gcagcttcagttagatctgaggatcgcatcaggattgaacgactcaccagtgaaaagttt
gattattcagatgctctgagacgggtctgtgaaatgtttgaaggagaggaaggaaaagta
aaacatataacatctctcccatcaagtgttgtaggctgcataggagccaccctggagtat
ctcaaggaatttaaactggatcgtattgttaaaatggctggaacaatccaaccgtacagc
ttgaagaaacattacatgagattgagtggagcaacagtgagaaacctagaggtcttagcc
aatggagttgatggcggagtgaaaggcagtttattctgggctcttgataaaacgcagaca
aagtttggatccagattacttcgccgctggatagttcagccattattaaatttagaagaa
atcaaagaaaggcaagatatgattgaagatattatgaattcagattctcctgtatataca
actctcagaaatgttctgtataaacttccagactttgaaagagccctcacaactatcttt
cataaaaagtgtagtccacatgaattttggatcgcagtaaatggattaagtcaagtgcat
gcaaaactctcaagagttagtggtaacttgacagacaatgtacgtgcacctgccatgagg
aatctgatagaagaggttttagatggactgtcagatattcaggcgtatgcaagtaatata
aatgaatcaagtgccaaagaaggcaaaaagactacactgtttaagagcttttcactgttt
ccaaaagtcattgagaagcaagaagcaataaaacaggtagagaaagaacttgatgctcat
agatctgatataggtaaggttctgcgactaccaggattcaagtacacaacggtgtctgga
ctagaatacctagttgaagtgaaaaatgcccaattaaaagctgttcccaaggactggaat
aaaataaatacgacaaaagcttgctgcagattcagaccacctgaggtagagaaattattt
acaaagttacaaattcttcgagaagaacttcaggctgaatgccatttggcatggctccaa
gtgctagactccttttctgagcactatcagcaacatcgacaagctgtgagattcctggct
acgattgatgtcctcattgctttagctagtgttgccaaatctcatggattttgtcgacct
aaaattcatgcaagtgacggtgaaaattgtggatttctacatatttctggtggtaaacat
cctgtgattagccaacttaaatatggtgaagaacaatatgtttcaaatgatactaatcta
aagggtgatggtcagcgagttatgcttgtgacaggaccaaacatgggtggaaagtcttgt
tatatgaggcaggtagcattaattgcactaatgtctcagattggcagttacgtccctgct
gacaatgtggaaatgtcagttttagatgcaatatatacaagaatgggagcagctgatgag
atttactcaggacgaagtacttttatggtagaagttggagaaactgccgatataatgcgg
gaagctacatgtcattctcttgtcatcttggatgagcttggtcgaggcacctcaacccat
gatggagtagctatcgctatggcctcacttgattacttcttgaataaagttaaatgtctg
acaatctttgtcactcactaccttcctctaacggagtttgaagtcctctatccagagagt
gtcggcaacttccacatggctttcttggtgaatgaagaagaattagatggagtagaggtt
gtgacatttttgtatcaactaacagctggaagtgccgggcagagttatggtcttaatgta
gctcgccttgcaaaaatcccacctcctgtattgaaaagagcttctgataaatctaaggaa
cttgcaaaaatatgcgggatgaaaaggaaagggaaggagttatttaagaagtttttaagt
accacagaatctccaagaagtttggtgcaagagttgattagcagtgaaatttga
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