Macrobrachium rosenbergii (giant freshwater prawn): 136849851
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Entry
136849851 CDS
T10429
Symbol
PNPase
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136849851 (PNPase)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrj03019
]
136849851 (PNPase)
03016 Transfer RNA biogenesis [BR:
mrj03016
]
136849851 (PNPase)
Enzymes [BR:
mrj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
136849851 (PNPase)
Messenger RNA biogenesis [BR:
mrj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
136849851 (PNPase)
Transfer RNA biogenesis [BR:
mrj03016
]
Prokaryotic type
tRNA degradation factors
136849851 (PNPase)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
136849851
NCBI-ProteinID:
XP_066979423
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All DBs
Position
21:31081487..31099587
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AA seq
763 aa
AA seq
DB search
MQHPRKLGCLLLNIYNRSLKTSGFYKSQQNVSFSKQSEKVEAKAEFSNGRSLLLETGEYA
RLADGAAVATVGNTSVLVTAVSKNRNGPHPGFMPLTVDYRQKYAAAGRIPSNYLRRELAP
TDKEILTGRIIDRSIRPLFAEGYFGDTQVSCQLLAVDGLHDPDVACINAASAALAISDIP
WEGPVGSVRVAYIDGEFITQPTRRELSKSALNLIVTGAERNLVVMLEGHAENILLQDLMK
AIKLGVKECQHIIRAIQELSKAAGKEKRTFTVPDEVPEEIMDSARTLSETRLRNIFTDSS
HNKLSRDHAVNALRLDVVEKLAKGYAGEDMQMFNSAFSKLAKEVFRNLILNEDSRCDGRS
LTDLRPIRCLVDLHRPLHGSSLFQRGQTQVQCTVAFDAPENIPKLDPLLEATGGHKDRNF
ILHYSFPSFATNEVARSGPISRREIGHGALAEKALRPLLPSQHPFAILLTSTVLESNGSS
SMATVCGGSLALMDAGVHISSPAAGVAIGLVTRYNKKQIEDYKLLTDILGIEDYMGDMDF
KIAGTRKGITALQADIKVPGITLKIVMEALQKATDAKSAILTIMNDALSKPRTAKDNLPV
LEKLTVPPHKRSRILGVGGLNIRKIQAETGVQLTWEDTSILVIFAPNHSAMEEAQEVLKE
MLKDEEPTLEFGSIYTATIVELRPQGVMVTLYDNMHPVLLHNSQLDTRKIQHPSALDLTV
GQQIKVKYFGRDPATGQMRLSRRAIQASTNAVKNLHKSEPTNV
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgcaacatcccaggaaattaggatgcctcttattgaacatttataacagatcattgaag
acatcgggattttacaagtcacagcaaaatgtgtctttttctaaacagtctgagaaggtc
gaggctaaagcagagttctcaaatggaaggtcgttgctcctagaaacaggagagtatgca
cgtcttgcagatggtgctgcagtagccacagtaggtaatacatcggttttggtgacggct
gtaagtaaaaatcgaaatgggcctcatcctggtttcatgccattaactgtagactatcgt
caaaagtatgcagcagctggacgcatcccttcaaattacctaaggagagagttagctcct
acagataaagaaattcttactggtagaatcattgatcgttcaatccgcccccttttcgca
gaaggttactttggtgacactcaggtttcttgtcagttgttagcagtagatggccttcat
gatcctgatgttgcctgtatcaatgcagcttccgcagcattagccatctctgatattcca
tgggaaggtcccgtaggatctgtacgtgtagcatatatagatggagaattcataacgcag
ccaactagacgagaactctcaaagagtgctttgaaccttattgtgactggtgctgaacgt
aatttagtagttatgcttgaaggccatgcagaaaatatactgctgcaggacctaatgaaa
gctatcaagcttggggtaaaggaatgccagcatataattagagcaattcaagagttatca
aaagctgcggggaaagaaaaaagaacatttacagttccagatgaggtgccagaagagatc
atggactctgccagaactttaagcgagacaagacttcgcaacatttttacagattcttcc
cataataaactttcgagggatcatgcggtaaatgctttacgattagatgttgttgaaaag
ttagcaaaaggatacgcaggagaagatatgcaaatgtttaactcagcattttcaaaacta
gctaaagaagtctttagaaatttaattcttaatgaagactcaagatgtgatggaagaagt
ttgacagacttgagacccatcaggtgcttagttgatttacatcgtcctttgcatggatca
tccctatttcaacgtggacagacacaggtccagtgcacagtggcatttgatgctccagag
aacattccaaaattagatccattattagaggcaacaggtggtcataaagataggaatttc
atcttgcattattcatttccctcttttgctacgaacgaagtagcacggagtggtccgata
tctcgacgtgagattggtcatggggctctggcggaaaaagcattaaggccacttttgccc
agtcagcacccttttgctatcttactaacatcaacagtattagaatctaatggttcttcc
tccatggcaactgtgtgtggtggtagcttggcccttatggatgctggagtccacatttca
tcaccagcggctggtgttgccattggccttgtaacacgttataataagaaacaaattgaa
gattataagctactaactgacatcttgggtatagaagattatatgggagatatggacttc
aaaattgctgggactcgaaaaggaataacagctctccaggcagacataaaagttccaggc
ataaccctcaaaatagtaatggaagcattacaaaaagcaactgatgccaagtcggctatt
ctcactattatgaatgatgccctgtccaagccacgtactgcaaaggacaacttgcctgtt
ttagaaaaattaacagtaccacctcataagcggagcagaattttgggagtgggtggtttg
aatatcagaaaaattcaagcagaaacaggggttcagcttacgtgggaggataccagtatt
ttggtaatctttgctccaaatcattcagccatggaagaagctcaggaggtgcttaaggag
atgcttaaggatgaagagccaacattagagtttggtagcatatatacagcaaccattgtt
gaactgcgcccacagggggtaatggtcacgctctatgataacatgcatcctgttttgctg
cataattcacagctggatacaagaaagattcaacatccaagtgccctagatttaactgtt
ggtcaacagataaaggtaaagtattttgggcgggaccctgccacaggacaaatgagacta
tctcggcgagctatacaggcctctacaaatgctgtaaaaaatcttcataaatcggaacct
acaaatgtataa
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