Macrobrachium rosenbergii (giant freshwater prawn): 136850309
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Entry
136850309 CDS
T10429
Name
(RefSeq) LOW QUALITY PROTEIN: poly(A) polymerase gamma-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
136850309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrj03019
]
136850309
Enzymes [BR:
mrj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
136850309
Messenger RNA biogenesis [BR:
mrj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
136850309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
136850309
NCBI-ProteinID:
XP_066980072
LinkDB
All DBs
Position
1:36348741..36366600
Genome browser
AA seq
1026 aa
AA seq
DB search
MESSKTLGMTSAISLAGPKPSDLLQTKKLEEYLREAKMFETDEEMNHRFEVLGKLNDLVR
SWIRDVSINHKNMPPQIADTVGGVKYSHSSYRLGVAGQGADIDALCVAPRHIERSDYFSS
FSELLKELPEVTEMRAVEDAYVXLIKMKYEGIEIDLLFXRLALKEINDDVELQEDSILKS
RCEKCVRSLNGCRVTDEILRQVPNRESFRLALRAIKLWAKRHGVYSNVLGYLGGVSWAML
VARTCQLYPNATASTLVEKFFLVFSKWSWPAPVYLKQPSDGKLGFKVWDPRVNVQDRFHL
MPIITPAYPQQNSTFNTTQSTKAVMVEEFMMGLQITEDIMLGKATWDKLFQXPSFFTKYK
HYLVILASASTPEDHLEWYGLVESKIRHLIQTLEHNPIIKTVHINPQAFSCCHEEYKGRP
HSAWFLGVDFKTCENINIDLTNDINTFVEIVYKQITYNKGYRDGMQVDCKYVKRKHLGNY
LSREVLDKYRPKSEDGQTRLPSKKRKSDSSQADFPLRESPDFNKKPRVDGSVPAKADDMP
AQLSTRKRKSDGGQTVSPSRESPDSNKKVKVDGAVPATSVLNDDDSNMSIDEAYPIPGLN
TEMNGTQCACAPHHHYVRQSAIVSVGCDSHGGGCKGDGGGECASLIPDIIEQAFQNLAVN
YKCNEYQKDHSYHYYPPLTSSDPALHGYDSYSYSSQSNVFYQHTQQSQLNVLPYSGSQNS
QPPSPLYQGHVLNPSLSTGRPSHYGSYTPPHHQEHHSFITNSFSRKVCDPVNSPLPYFQT
RGSQNQRLYPPSPMSHMHIQHPIGPQSKPLYPHTSNTACNVRDYPLTPPPPSLSAPPPLP
PTSLSVLPLPPPAVPPRPEMLLLPIPLKANLPHPSSCPLPTPPSHIFMPGHSSPPYSMQN
SQYSNPNHLQKPQSGVYHHLHKYSSNKVSSQTSSRSVNHHKSGLSNSSFTPPISSSSHQK
QSRSNQLHHHPTLKNLHQRSRNSSPSGSVFVTRPTAKTAPLVLAKQKLSCVELPDIVNPD
PRIGCL
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggaatcctccaagactctgggtatgacctcggccattagtcttgcagggcctaaacca
tcagatttattgcaaacaaagaaattggaggagtaccttcgagaggccaagatgtttgaa
acagatgaagaaatgaatcacaggtttgaggttctgggcaagcttaatgacctagttcgt
tcttggattcgggatgtaagcatcaaccataaaaatatgccaccacagattgcagataca
gttggtggtgtaaaatattcacattcgtcatatcgtctaggtgttgctgggcaaggtgct
gatatagatgctttgtgtgtagcaccaagacatattgaaagatcagactacttttctagt
ttctcagagctcttaaaagagctgccagaggtcacagaaatgagagctgtagaggatgca
tacgttnntctcatcaaaatgaagtatgaagggatagagattgatttactgttcnataga
ctggctcttaaagaaataaacgacgacgttgaacttcaagaagacagcattttaaaatct
cgatgcgaaaaatgtgtcagaagcctgaatggttgccgtgtaacagatgaaattcttcgt
caagttcccaaccgagaaagttttaggttagccttgagggctattaaactatgggccaaa
cgtcatggtgtttatagtaatgtattaggctacttgggtggagtatcgtgggcaatgttg
gtagccagaacttgtcagttgtatccaaatgcaacagcatcaacattagtagaaaagttc
tttttggtgttttcaaaatggtcgtggccagctcctgtttatctcaagcagccatctgat
ggaaaactgggttttaaggtttgggaccctagagtaaatgtgcaagacagatttcacttg
atgcccataatcacccctgcatacccacagcaaaattcaacgttcaacaccacgcaatca
acaaaggcagtcatggttgaagaattcatgatgggcctccagatcacagaggatataatg
ttagggaaagccacctgggataaacttttccaanccccaagcttcttcaccaaatataag
cactatctcgtcatattggccagtgcttcaacccctgaagatcacctggagtggtatggt
ttagtggaaagtaaaataagacacttgatccagacccttgaacataatccaataataaag
acggtccacattaatccgcaagctttcagctgttgtcatgaggagtacaagggcagacca
cactcggcatggtttcttggagtagatttcaaaacgtgtgaaaatatcaatattgacctc
acaaatgacattaatacttttgttgaaatagtgtacaaacaaatcacatataacaaggga
tacagagatgggatgcaggtcgactgtaagtatgtgaagagaaaacacttggggaactac
ttaagtcgagaagtgttagacaaatacagaccaaaatccgaagatgggcagaccagactg
ccgtcaaagaagcggaaatctgattctagccaggcggattttccgttgcgggaaagccct
gactttaacaaaaagccgagggttgatggtagtgttccagcaaaagccgacgatatgccg
gctcaactttcgacgcggaaaaggaaatcggacggcggccaaactgtgtcgccttcgaga
gagagcccggattccaacaaaaaagttaaagtcgatggtgctgtccccgcaacgtctgtc
ctcaatgatgatgactccaatatgtccatagacgaagcgtacccaattccgggtttaaat
acagaaatgaatggtacccagtgtgcgtgtgcaccgcatcatcattatgtccgccaaagt
gctattgtcagcgttggttgtgacagtcacggtggaggatgcaagggtgatggtggtggt
gagtgtgcctcgttaataccagacatcattgaacaggctttccagaatttagctgttaat
tataagtgtaatgaataccagaaagatcattcttaccattactatcctcccttaacctcc
tcagatccagcattacatgggtatgattcttatagttattcctcccaaagtaatgttttc
tatcaacatacacaacaatctcagctgaatgttttaccatactctggttcccaaaattct
cagcctccttctccattgtatcagggacatgtgttaaacccttcactgtctacagggcga
ccatcacactatggctcatacacccctcctcatcatcaagaacaccacagtttcataaca
aatagcttttctagaaaagtctgtgatcctgtgaatagtccgttaccttacttccaaact
cggggatctcaaaaccagcgattatatccaccgtcccccatgtctcacatgcacatacag
catcccattggtcctcagagcaaacctttatatcctcacacgtccaacactgcatgtaat
gtgagagattaccctctaacaccgccccctccatccctttctgcaccaccaccactacca
ccaacttcactttctgtacttccattgccaccaccagcagtgccaccgcgtcctgaaatg
ttactgttacctatacctctgaaagcaaatttacctcatccttcatcatgtcctcttcca
actcctccatctcatatatttatgccaggtcactcttcacctccctactccatgcagaac
tcgcagtactctaatcccaatcatttacaaaagccccagagtggtgtctaccatcacctc
cacaaatattcttccaataaagtatcgtcacaaacatcttcacggtctgttaatcatcac
aaatcaggattgtctaatagctcattcaccccacccatttcctcatctagtcaccaaaaa
cagagtagatcaaatcaacttcaccaccacccgacccttaaaaatctccaccagagaagt
cgcaacagttctcccagtggctccgtgtttgttacacgtcccactgccaagactgcaccc
ctggtgcttgccaaacagaaactatcgtgtgttgaacttcccgacatcgttaacccagac
cccagaattggctgcctgtaa
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