Macrobrachium rosenbergii (giant freshwater prawn): 136851321
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Entry
136851321 CDS
T10429
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 27C-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
136851321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrj03019
]
136851321
Messenger RNA biogenesis [BR:
mrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
136851321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
136851321
NCBI-ProteinID:
XP_066981436
LinkDB
All DBs
Position
23:complement(17737595..17793600)
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AA seq
505 aa
AA seq
DB search
MKKDTAWRDMMTQHPGGGGNGPRGRNIPHDGEEKGKMFVGGLSWETTQETLQRYFGQYGE
VIDCVVMKNSDTGRSRGFGFVTFADPNKVDVVLKSGPHELDGRTIDPKACNPRSMQKQKK
NGNWPKVFLGGLPSNLTETDLRNFFSRFGAVMEVVIMFDQEKKKSRGFGFLSFETEEAVD
RAVAEHFVNINGKQKVEIKKAEPRDASKAQEDAGQWGTPPDNQWGMPVGPPGMPGLNNGM
GPGNMGPPLGPPLGPHNSQMGGHMGTQGMVQGPYQGWGTPPQQQGYPPQGYGAPQGPQGY
QGWGAGQTLQQWGAPNYGSPGGQQYGSFGPMEGGSWGWTSPTSPSSTPQPHERDPYGRNA
PLGALVTGAPGAPSPNLAAAAAPQPGGKTSADYSSWGQYNYNQMTSESTAAAAAVFNHGH
GRGYNDGGPQGQAPAHQGNTRAPYAEDAAKEESIMKGGKRKVVDDDLELCKKRKFHPEQD
KESIENRAVAGYSGDMTVEQYMTYM
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagacactgcatggcgagatatgatgacacaacaccctggcggtggtggcaat
ggtcccagaggacggaatatcccacacgatggcgaggagaaagggaaaatgtttgttggg
ggcctgtcatgggaaacaacccaggagaccctccaacgttactttggtcaatatggtgag
gtcattgattgcgtcgtaatgaagaacagtgacacaggaaggtctagagggtttggtttt
gtcacgtttgcagaccccaacaaggttgatgttgttttgaaaagtggtcctcatgaattg
gatgggagaactattgacccgaaagcgtgcaatccacgaagtatgcagaagcagaagaaa
aatgggaactggcctaaagtttttcttgggggtctcccatccaacttaaccgagacagat
ttgcggaattttttctcgaggtttggtgctgttatggaagtggtgattatgtttgatcaa
gagaagaagaaatccagaggctttgggtttttgtccttcgaaacggaagaggcagtggat
agagcggtggctgagcactttgtcaacataaatggaaagcagaaggttgagataaagaag
gcagagccacgagatgcaagcaaggcgcaggaggatgccggacagtggggcactcctcca
gacaatcagtggggaatgcctgttggaccccctgggatgcctggactcaataatggaatg
ggcccaggtaatatgggtccaccattaggtccccccttaggacctcataatagtcagatg
ggagggcacatgggaacccaaggaatggttcaaggcccgtatcaaggctggggtactcct
ccgcagcagcaaggatacccaccgcaggggtatggtgccccccagggccctcaaggctac
cagggttggggtgcaggccaaacactgcagcagtggggtgcacctaattacgggtctcca
ggaggccagcaatacggaagttttggaccaatggagggtggatcgtgggggtggacgtcc
cccacctctccctcctccacacctcagccacacgaacgggatccatatggacgtaatgct
ccccttggcgctttggtgacaggagcgcctggtgccccgtcacctaatctagccgctgca
gcggctcctcagcctggggggaaaacctcagcagattatagttcctggggtcagtacaac
tacaaccagatgacaagtgagagcactgcggctgcagcagcagtgttcaatcatggtcat
ggtcgcggttacaacgatggtgggcctcagggacaggcacctgcccaccagggcaatact
agggccccctacgcagaggatgcagccaaggaagagagcataatgaaaggagggaagagg
aaagtagtggatgatgatttggagttgtgtaagaagaggaaatttcaccctgaacaggat
aaggagtcaattgagaatagagccgttgcaggatattcgggggatatgacagtagagcag
tatatgacttatatgtaa
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