Macrobrachium rosenbergii (giant freshwater prawn): 136851595
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Entry
136851595 CDS
T10429
Symbol
brm
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
136851595 (brm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrj03021
]
136851595 (brm)
03036 Chromosome and associated proteins [BR:
mrj03036
]
136851595 (brm)
Transcription machinery [BR:
mrj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
136851595 (brm)
Chromosome and associated proteins [BR:
mrj03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
136851595 (brm)
Chromatin remodeling factors
BAF complex
136851595 (brm)
PBAF complex
136851595 (brm)
GBAF(ncBAF) complex
136851595 (brm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
SnAC
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
136851595
NCBI-ProteinID:
XP_066981993
LinkDB
All DBs
Position
23:46391129..46525335
Genome browser
AA seq
1656 aa
AA seq
DB search
MSAPSPNPGSAASPMGPPQQALSPMPPPQATSPAVGPPQAQSPMGPPQTPSPMGPPVMSP
GPGGPPPAQQGPPPSGPAPGMVPQGAPGPHHPYPQGPQGSQGWQQPPPGPYANSYQPQPQ
QQQQGPGVHHPAQGPPGGPPVSGLPPPTSGGGPNGPSPSGGSYQQENLNALQKAINTMED
KGMQNDPRYADLVSMRAKYGSMGPPPATTGAGTTPGGPPGPPSGPGYGPSGPGGPEGPRP
GLLNASQMHQLRAQIMAYRCIARNQPVPPQVTALVQGRRLDQDPSRAPGPPGPPGPSGPP
GPPGPSGPPGPPVSSGPPGPPTGPPTGPPQGPPVPTTGPPQGPPGPPGPPGPPGPPTMQY
PRHPGPMPGVHPPFNGTSVSGPMPGARPPYNGTDPSQTPPPPPSAVTSQPGPNGPLPGAT
PRPPVPQAAPGAPVTAPGGKISRVTPIQKPSGIDPLILLQERENRLAVRIAHRIDELSGL
PATMAEDLKMKAQIELRALRLLNFQRQLRAEVVGCNRKDTTLETAINIKAYKRTKRQGLR
EARITEKLEKQQKLEAERKKRQKHQEYLNAVLQHGRELKDFHRQNTQKIIKLNKALLMHH
MNAEREKQKEQERIEKERLRRLMLEDEEGYRKLIDEKKDKRLAYLLTQTDEFIANLTEMV
KAHKEDQRLKSKEERKKQREERRKAREADNSEEGGAQERHIPVMESATGTIVSGKAAPLA
SNLEAFLAANPGWEVLPEDDSETSDDENEEEESEKKVLSEEESTSPATTENKLDAAEKNP
KEVLKKAKVEDDEYKDVTGEKNYYSIAHTIKETVTEQAKIMVNGSLKEYQVKGLEWLVSL
YNNNLNGILADEMGLGKTIQTIGLITYLIENKKNNGPYLIIVPLSTISNWALEFEKWAPT
VQVVTYKGSPQVRRIVQSQMRATKLNVLLTTYEYIIKDKAVLSKLRWKYMIIDEGHRMKN
HHCKLTQTLNTFYNAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFA
TTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYIIKCEMSGLQHVLY
RSMQSRGVMLCAEDKKGQKSNTKALMNTIMQLRKLCNHPFMFQHIEEAYCNHAGFSGGIV
QGPDIYRASGKFELLDRILPKLHLTNHRVLLFCQMTQLMTIMEDYLMFKGFKYLRLDGMT
KSEDRGELLRMFNTSREYFLFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAH
RIGQKNEVRVLRLMTVNTVEERILAAARYKLNMDEKVIQAGMFDQKSTGSDRRQFLQAIL
SNDNEEDEEEDEAPDDETINQMIARGEDEFEIFQKVDQDRKSTETRARLMAEDELPEWML
KEEDSEEVDDEEPEELGDRRARSKKEVDYSDSLTEKEWLRAIGAVEEDGKEAMDEEEEEV
NGSSKSKRGSKGKRRRDDMDLDDDPKPKKRGRPAREKPNPKNKRVIRQLKRLMDIVIKYE
DSDGRVLSEPFMKLPSRRELPDYYNIIKRPMDIHKILNRIDEGRYDDMNDLEHDFMLLCR
NAQEYNEESSMIYEDSTVMQSVFLNARERIEAEADNVQEEEEEDDDDDDEEEETRVKKGK
KSKGEKGRGRRKRVKYADDSDDDDDDDDDVSKKEVE
NT seq
4971 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctccaagtccaaatccagggagtgcagcgtcccctatgggtcctccccaacag
gcattgtcaccaatgcctccaccacaggcaacatcgcctgctgtaggacctccacaggcc
cagtctcctatgggacccccccagactccttcaccaatgggtcctcctgtcatgtctcca
ggtccaggtggcccaccaccagcacaacagggacctcctcccagtggccctgctcctgga
atggtaccccaaggggctcctggtcctcaccatccttaccctcaaggaccacaagggtct
cagggatggcaacagcctccaccaggaccctatgcaaatagttatcaaccacaacctcaa
caacagcagcaaggtcctggagtacaccatccagcacagggccctccaggtggtcctcca
gtcagtggacttccacctccaaccagtggtggcggccctaatggtccaagtcccagtggt
gggagctaccagcaagagaatcttaatgctctgcaaaaggccatcaacactatggaagat
aaaggaatgcaaaatgatcctagatatgcagacttagtcagcatgagagccaagtatggc
agtatggggccacccccagcaacaacaggtgctggcactacacctggaggtccaccaggc
cctccaagtgggcctggttatgggccttctggtccgggtggtccagagggtccacgacca
ggactccttaatgcctctcagatgcatcagttaagggcgcagattatggcgtatcgttgt
attgctcgtaaccaacctgtacctcctcaggtcactgcgcttgttcagggccgacgtctt
gatcaggatccatcaagagcacctggccctcctggcccaccaggaccctcagggcctcct
ggcccaccaggcccttcaggtcctcctggccctccagtatcatcaggacccccaggtcca
cctacaggtcctccaactggtcctcctcagggaccacctgtcccaactaccggtccacct
cagggtccaccaggaccacctggcccaccaggccctccaggaccacctactatgcagtat
cccagacatccaggtcctatgccaggtgtgcatcctcctttcaatggaacttctgtttca
ggtcctatgccaggggcacgaccaccttacaatggaacagatccatcacaaacacctcct
ccccctcctagcgctgtaacatctcaacctgggccaaatggccctctccctggagcaact
ccaagaccaccagtaccgcaggcagcacctggagctccagtcactgccccagggggaaaa
atcagtcgtgtaactcccattcaaaaacctagtggaattgatcctttgatactcttgcaa
gaaagagaaaacagattggccgttcgtattgctcatcgcatagatgaattgagtggtctc
ccagctacaatggctgaagatttgaaaatgaaagcccagattgagcttagagctttacga
cttttaaatttccagcgtcagttacgtgctgaggttgttggttgcaatagaaaggacact
acattagaaactgccatcaatatcaaggcatacaagagaaccaagaggcaagggttgaga
gaagcacgtattacagaaaaattggagaagcaacagaaacttgaagctgagaggaagaaa
cggcagaaacaccaggaatacctcaatgctgtgttacagcatggcagagaactcaaggac
ttccatcgtcagaatactcagaagattataaagctaaacaaggcattgctaatgcaccac
atgaatgcagagagagagaagcagaaggagcaggagcgtatagagaaagaacgtttgcgt
cgtctcatgctggaggatgaagaaggttatcgtaagctcatcgatgaaaagaaagacaaa
cgattagcatatctcctcacgcagactgatgagttcattgcaaacctcacggagatggtg
aaggcacacaaagaagaccagcgacttaaaagcaaagaagagagaaagaagcagcgagag
gaaagacgcaaagcacgggaagctgacaatagtgaagaaggtggtgctcaggaacgtcac
atacctgttatggagtctgctacaggaactattgttagtggaaaagctgctcctttggct
agcaacttggaggctttcttggcagcaaatcctggctgggaagtattaccggaagatgat
tctgaaacatctgatgatgagaacgaagaggaggagtcagagaagaaagtcctttcagag
gaggaaagcacatctccagcaacgactgagaataagttggatgcagcggagaagaatccc
aaagaggtcctcaagaaggcaaaggttgaagatgatgagtacaaagatgtaactggagaa
aagaattattactccattgcccatactatcaaggaaactgttacagagcaggcaaagatt
atggtcaatggttctctgaaagaataccaggttaagggcttggagtggttggtgtctctt
tacaataacaacctcaatggtattttagctgatgaaatgggtctgggtaagacaattcag
actattggtctcattacgtacctgatagagaataagaagaataatgggccttacctcatc
attgtaccactttctaccatatctaattgggctttggaatttgaaaagtgggcaccaact
gttcaggttgtgacgtacaaagggtcaccgcaggttcgaagaattgtgcagagtcagatg
cgcgccaccaaattgaatgtgcttctaacaacttacgaatatattattaaagacaaagct
gtactttcaaaactgcgctggaaatacatgataatcgatgagggtcatcgtatgaagaat
catcattgcaaacttactcagaccctgaacactttctacaatgcgccacatcgtctcctc
ttaactggtacacctctacaaaataaactaccagaattgtgggctcttctcaatttcctg
ctcccatccatattcaagtcctgttccacttttgagcagtggttcaatgctccatttgcc
acaacaggagaaaaggtggagctgaatgaagaagaaaccattttgattatccgtcgtttg
cacaaagtattgcgaccattcttgcttcgaaggttgaagaaagaggtagaagctcagcta
cctgagaaggttgaatacatcataaaatgtgagatgtccgggcttcagcatgtactctac
cgttcaatgcagtcgcggggtgttatgctctgtgctgaagataagaagggacaaaagagc
aacaccaaggccctcatgaacactattatgcagctcagaaaactctgcaaccatccattc
atgttccaacatattgaagaggcatactgcaaccatgcagggttctctggaggtattgtg
caaggtccggatatttaccgtgcctctggtaaatttgaactacttgatcgaattcttcct
aagcttcaccttacaaaccatcgtgtactgctcttctgtcaaatgacccagctgatgacc
attatggaagattatctcatgtttaaaggcttcaagtatttaagattggatggcatgacc
aagtcagaggatcgaggtgaattgctgcgcatgttcaacacatcccgggaatatttcctg
ttcttactctctactcgtgctggtggtttgggtcttaacttacagtcagcagatactgtc
atcatctttgattcagattggaaccctcatcaagatttacaggctcaagatcgtgcccat
cgtattggtcagaagaatgaggtgcgtgtgttacgtctcatgactgttaacaccgtggag
gaacgtattttggctgctgcacgttacaagctcaacatggatgagaaagtcattcaagct
ggtatgtttgatcagaagtctacaggatctgaccgaagacagttcctccaagctattctc
tcaaatgataatgaagaagatgaagaagaggatgaagctccagatgatgagaccatcaat
cagatgattgctcgaggggaagatgagtttgaaatcttccaaaaagttgatcaggataga
aagagcacagaaaccagggcacgtctaatggcagaagatgaattgccagaatggatgttg
aaggaagaagattccgaggaggtagatgatgaagaaccggaagagcttggtgatcgtcga
gctcgttcaaagaaggaggttgattactccgatagcttgactgagaaggaatggctacgt
gccattggagcagttgaggaggatgggaaggaggccatggatgaggaagaagaggaagtc
aatggcagtagcaagagtaagagaggttctaaagggaaacgtaggcgtgacgacatggac
ctggatgatgatcctaaacctaagaaacgtggcagacctgccagggaaaaacctaatcca
aaaaataaacgtgttattcggcagctaaaacgtttaatggatattgtcatcaaatatgaa
gacagtgatggtcgcgtacttagtgaaccatttatgaagttaccgtcacgtcgtgagctc
cctgattactacaacattattaagagaccaatggatatccacaaaattctcaataggatt
gatgaaggaagatatgatgatatgaatgaccttgaacacgattttatgctgttgtgccga
aatgcccaagaatataatgaagaatcatccatgatttatgaagattctactgttatgcag
agtgttttcctcaatgcacgagaacgtattgaagctgaggctgacaatgtgcaagaggaa
gaagaggaagatgatgacgatgatgatgaagaggaagaaaccagagtgaagaaagggaaa
aagagcaagggtgaaaaaggcagaggaagaaggaaaagagtaaaatatgcagatgattct
gatgatgacgatgatgatgatgatgatgtgagtaagaaagaggtagagtga
DBGET
integrated database retrieval system
