Macrobrachium rosenbergii (giant freshwater prawn): 136853006
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Entry
136853006 CDS
T10429
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
136853006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrj03021
]
136853006
03036 Chromosome and associated proteins [BR:
mrj03036
]
136853006
Transcription machinery [BR:
mrj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
136853006
Coactivators
SAGA/TFTC/STAGA complex
136853006
Chromosome and associated proteins [BR:
mrj03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
136853006
STAGA complex
136853006
TFTC complex
136853006
SAGA complex
136853006
SLIK complex
136853006
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
WD40_Gbeta
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
EIF3I
TFIID_NTD2
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
NBCH_WD40
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_SCAP
DSE1_N
Beta-prop_VPS8
Beta-prop_RIG_2nd
CFAP251_N
Beta-prop_Vps41
PAC11
Beta-prop_WDR41
Beta-prop_HPS5
Beta-prop_TEP1_C
ASA1
WD40_RFWD3
Beta-prop_NOL10_N
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_EIPR1
TRM82_WD
Beta-prop_Nup120_160
WDR54
Beta-prop_RIG_1st
Beta-prop_WDR35_TULP_N
Beta-prop_MIP2
Tricorn_2nd
eIF2A
PROPPIN
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
136853006
NCBI-ProteinID:
XP_066984237
LinkDB
All DBs
Position
26:8699789..8714038
Genome browser
AA seq
652 aa
AA seq
DB search
MKKVRTEKVMANVNDYLKRRNLELLGSGGATSSSEQQAGVLGLVSPSTPNTFTFSTTSTQ
HTHVDHQYVRLKSWMMEASEPCRSELSQVLFPLFVHLYLELVTGTGRQAANKFFKKHYQV
FLVNRDYEHTLSQVIGASGVNASGDLNSSPVIQNLKSGKYLVRLSELTLNYFLRYLKASE
NPTLLQIFNTYIEVEVDESGAGSTGAVFRTPDASSLGSGNLVNGHTPESLSSEAASTADG
MDCSVEELRKVKEVMSAIRIALPTPPSLCVYTVYNAYNGLSCATVNKQGRLLSCGFEDSV
IKLWKLTPSDHNAGLGRAKTGMGPRGGISHTLLACDDSRTEDDEEGMEEEERDEDEMAAD
LRNGGRRRNRGGELFALRGHSGPVYDMAFTHESSHLLSVSEDCTMRLWDLESGQAVALYR
GHQYPAWCLAVAPLTMYMATGSYDTTVRIWYTDATYPLRTLSGHTRSVDSVAFHPNGSYL
ASGSCDRSIRLWQVTDGDVARILPHHKTAINSLAFSPNGKYLASGGEDGTVAVWDLAAGR
VITELFSGTQATTGIPGVSTPHMDSVVDLSWSTDSSLLMSASSDGCVRTSQLKQGIASDG
GSAWDLCEVGQFQCCGNSNGSSTSYVLGGSLLHTSFTCHNYLTAVVAQDVER
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggttagaacggagaaagtgatggccaatgtcaacgattatttaaaaaggaga
aatttagagttacttggctctggaggtgcgacaagttcttcagaacaacaggctggtgtt
ttaggcttagtttccccatcgacacctaacactttcaccttctctacaacctccacacaa
cacactcacgtagaccaccaatatgtcaggctcaagtcctggatgatggaggccagtgag
ccatgccgttcggaattgtcacaagttctgtttccgcttttcgttcatttgtatctggaa
ctcgtcaccggcactggccgtcaggcagctaacaaatttttcaaaaaacattaccaggtg
ttcttggtgaatcgtgactatgagcacacactgtcacaagtcataggcgcttcgggtgtg
aacgcatctggagatcttaactcctctcctgtcattcagaatcttaagagtggaaagtat
ttggtacgtctgagtgagctgacgctcaactacttcttaaggtacctcaaagctagtgaa
aatcctactttgcttcaaattttcaacacttacattgaagttgaggttgatgaatccggt
gctgggagtactggcgcagttttcaggactccggatgccagttccttgggttctggtaat
ttagtcaatggacacactcctgagtccctttcttctgaggcagcatccacagctgatgga
atggactgtagtgtagaggaactgaggaaagtgaaagaggtgatgtctgccatcagaata
gccctgccaacaccaccttctctgtgtgtgtacactgtgtataatgcgtacaatggtctt
agttgtgcaactgtgaacaaacagggtaggctgctatcttgtggattcgaagacagtgtg
ataaagctgtggaaactgacaccctcagatcataatgcaggtttgggtagggcaaagaca
gggatgggtcctagaggtgggatatcccacacactcttagcttgtgatgactcacggact
gaagatgatgaagagggaatggaagaagaggagagggatgaggacgaaatggcagcagat
ttacggaatgggggcagaaggagaaatcgcggaggtgaattatttgcgttgagaggccat
agtggacctgtttacgatatggcttttactcatgagtcaagtcatttattatctgtcagt
gaagattgtactatgcgtttgtgggatttggagagtggtcaggcagtggcattatataga
ggacatcagtacccagcttggtgcttggcagttgccccactcacaatgtatatggcaact
gggtcctatgataccactgtgagaatatggtatacagatgcaacatatcctctgcgtacc
ctcagtggtcatactcgctctgtggatagtgtagccttccaccctaatggctcctacttg
gcatctggatcgtgtgatcgtagcattaggctttggcaagtgacagacggggatgttgca
aggattttgcctcatcacaagactgctattaattccttagccttttccccaaatggaaag
tatcttgcatctggcggtgaagatggaacagttgctgtttgggacctggctgcgggtcgg
gttataacagaactctttagtggaacacaagcaactacggggatccctggggtatcgacg
cctcacatggactcggttgttgatctcagctggtcaacagactcatctctgttaatgtct
gcttcaagtgatggatgtgtacgcacaagtcagcttaagcaaggaatagctagtgatgga
ggatctgcatgggacctgtgtgaggtgggccagtttcagtgctgtggcaattcaaatggc
agtagtacaagttacgtattgggcggatccctacttcacacttctttcacctgtcacaac
tacctcactgctgtcgtagcacaggatgttgagagatag
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