Macrobrachium rosenbergii (giant freshwater prawn): 136853057
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Entry
136853057 CDS
T10429
Symbol
trbd
Name
(RefSeq) ubiquitin thioesterase trabid isoform X1
KO
K11862
ubiquitin thioesterase ZRANB1 [EC:
3.4.19.12
]
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mrj01002
]
136853057 (trbd)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mrj04121
]
136853057 (trbd)
Enzymes [BR:
mrj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
136853057 (trbd)
Peptidases and inhibitors [BR:
mrj01002
]
Cysteine peptidases
Family C64
136853057 (trbd)
Ubiquitin system [BR:
mrj04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
136853057 (trbd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AnkUBD
OTU
Zn_ribbon_RanBP
DUF5569
Motif
Other DBs
NCBI-GeneID:
136853057
NCBI-ProteinID:
XP_066984392
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All DBs
Position
26:complement(13393291..13429473)
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AA seq
844 aa
AA seq
DB search
MSEGGKKWQCGRCTYLNYASALRCTMCTVPRSPHLIVEAGTDIYQLGCQAGPPTRPPPEG
GLPPQEVDKWTCHLCTYRNFPKALRCTQCRTPRLSLADQMANMSLAKPASPSPTKPVTTI
PLNPAAPTPPATAAVTSITTSPTLVTSAKIVTGSSITTTTPTNNRTGGQSPNKGVPGQPG
CIHGAGAENESPGGTPPGGAGRCSPQGAGMTQSQSRHEGEPAVPSYKWRCRACTYENWPR
STKCVMCGTPKGLCPPAAQSQPARLATPPPPTDSKNNNNNSSNIVTTPSEPCEIPNKVEI
IQETSEVQQTDINAKNRENIIEISKSRISEPQVQEQQLISQRNANETKENSSIATNMSTN
IGPGAVSHRPGEGAMALNNYETERLLRQLRRRLREADWAWLNACNGVVEGNYEPVEAYLS
AGGDPMRQLTSADVKLLSRPSAFDEGHTLVHLAIRFGREDLLATILSRMDGGGTGVKRVP
SYVAPDLANDIRRHMSASIRQRKGPFPCHFVSELVTFSLPADIEDLPVSVQEQLFEELLD
RDAQKQLEEDAPIINWSLEITDRLGSRLYALWNRTAGDCLLDSMLQSTWGVFDRENVLRR
ALSDSLSEASHLFYPRWKEYERWQARLLDYYVPEGQVLEEWAELICLASQPGAALEQLHI
FVLAHILRRPVIVYGVKCVKSFRGEDLGFARFEGVYLPLLWEPSFCWKSPIALGYTRGHF
SALVPMEPDSPDNLGAGAILDAGESQVVFLPLMTHDAKLLPVHFLTQAEVGCEETLLRQW
LEVCVSEGGVLVAQQHITKKPLTVAQMTEEWLNHYRRLAQMERAPYHRPLTTQGYSSDGD
SEEE
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaggaggcaagaaatggcaatgtggaagatgcacgtatctcaattatgccagt
gctctgcggtgcaccatgtgcacagtaccccgctcaccccatctcattgtagaagctggc
accgacatctaccaactgggatgtcaggctggacctccaaccagaccaccaccagaaggt
ggtcttcctccacaagaggtcgacaagtggacttgccacttgtgtacataccgcaatttt
ccaaaagcactacgttgtacccagtgccgcacacctcgcctttcattagctgaccaaatg
gcaaacatgtctttagcgaaaccagcttcaccttctcctacaaaacctgtcactaccata
cctcttaaccctgctgctcctactcctccagcaactgctgcggttacgtcaatcaccaca
tctcccacccttgtaacatctgccaaaatcgtcacaggatcatccattactaccactaca
ccaactaataaccgcacgggtgggcaaagcccaaacaaaggtgttccagggcaaccgggt
tgcattcacggagcaggagcagaaaacgaaagtccaggagggacaccacctggtggagca
gggcgatgtagtcctcaaggagcaggaatgacccagtctcaatctcgtcatgaaggagag
ccggctgtgcccagttacaaatggcgctgccgggcatgtacatatgaaaattggccacga
tcaaccaagtgtgtcatgtgtggcacccccaaaggtctttgccctcctgcagctcagtca
caacctgctcgccttgctactccccctcctccaacagacagcaaaaacaataataataat
agttcaaatatagttacaacaccaagtgaaccttgtgagataccaaacaaagtggaaatt
atacaagaaacaagtgaagttcaacagactgacattaatgctaaaaacagagaaaatata
attgaaattagcaaatctcgaataagtgaacctcaggtccaagaacagcagctaatatcc
caaagaaatgcaaatgaaactaaggaaaatagtagtattgctactaacatgagcacaaat
atcggcccaggtgctgtcagtcatcgacctggagaaggagctatggctctgaataactac
gaaactgaacgactgttgcggcagcttagacgtcgattacgggaagcggattgggcctgg
ttgaatgcatgcaatggtgttgtggaaggcaactatgaaccggtggaagcatatttatct
gcaggtggtgatcctatgagacagttaacaagcgcagatgtaaaattgctgtcacgtcct
tctgcatttgatgaaggtcatacattagtgcatttagccatcaggtttggccgtgaagat
ttattggctacaatactctctcggatggacgggggtggcactggagtcaagagggtccca
tcttatgttgcacctgacttggccaacgacattcgtcgtcacatgtcggcttccatccgc
cagaggaaaggtccatttccttgccattttgtatccgagcttgttacattttctctgcct
gcagatatcgaagatttacctgtaagtgtacaagaacagctgtttgaagaattactagac
agagatgcccaaaagcaactagaggaagatgctcctatcattaattggtccttagaaatt
acagatcggctgggatcaagactatatgctctttggaatcgcacagcaggggactgcctc
ctagactcaatgctgcaatctacctggggcgtatttgatcgagagaatgtcttgagaaga
gcattatcagacagcttgtcggaagcttctcatttattctatccccgctggaaagagtat
gaacgctggcaagctcgcctgttagactattatgttccagaaggtcaggttctagaggag
tgggcagaactgatatgcttggcctctcaacctggtgctgccttggaacagctacatata
tttgtgttggcgcatattcttagaaggccagtcatcgtgtacggggtcaagtgtgtgaag
agttttcgaggggaagatctaggatttgctagatttgaaggtgtttatttgcctctgttg
tgggaaccttcattttgctggaagtctcccatagccttaggatacactcggggtcacttc
tcagctctggtgcccatggaacctgattctcctgataatttaggagcaggcgcaattcta
gatgcaggagaatctcaagtagtatttctacctttaatgacccatgatgccaaacttcta
ccagtccactttctcacacaggctgaggttggttgtgaggaaaccttattgaggcagtgg
ttagaagtgtgtgttagcgaaggaggcgtgcttgtcgctcagcagcacataaccaaaaag
ccattaactgtagcacagatgactgaggaatggctcaaccattaccgaagactagcgcaa
atggaacgtgccccatatcaccgcccattaacaacccagggatactctagcgatggggat
tctgaggaagaatga
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integrated database retrieval system
