Macrobrachium rosenbergii (giant freshwater prawn): 136853119
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Entry
136853119 CDS
T10429
Symbol
beta'COP
Name
(RefSeq) coatomer subunit beta' isoform X1
KO
K17302
coatomer subunit beta'
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mrj04131
]
136853119 (beta'COP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mrj04147
]
136853119 (beta'COP)
Membrane trafficking [BR:
mrj04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
136853119 (beta'COP)
Exosome [BR:
mrj04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
136853119 (beta'COP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_CAF1B_HIR1
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_LRRK2
BBS2_Mid
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
136853119
NCBI-ProteinID:
XP_066984518
LinkDB
All DBs
Position
26:complement(26984907..27179969)
Genome browser
AA seq
1455 aa
AA seq
DB search
MPLRLDVKRKLTARSDRVKSVDLHPTEPWMLASLYNGNVHVWNIESQQLVKSFEVCDLPV
RASKFVARKNWVITGSDDMQVRVFNYNTLERVHQFEAHSDYVRCIAVHPTQPFILTCSDD
MTIKLWNWDKKWSCQQVFEGHSHYVMQIVINPKDNNTFASASLDRTVKVWQLGSPQPNFT
LEGHQRGVNCVDYYHGGDKPYLISGADDSLVKIWDYQNKTCVQTLEGHSQNVSSVSFHPE
LPIILTGSEDCTVRVWHVNTYRLESTLNYGLDRVWCISSLKGSNNVCFGYDEGSVMIKLG
REEPAMSMDVSGKIVWARHSEIQQANLKAMGETEILDGERLPLAVKDLGACDIYPQTIAH
NPNGRFVVVCGDGEYIIYTAMALRNKAFGPALEFVWALDSSEYAIRESNFVVKLFKNFKE
KKSFKPEFGCEAIFGGYLLGCRSSATGLAFYDWETQELVRRIEIQPRQVFWSENGDYVCI
ATDENYFILKYSSEAVANARDNKENVTEDGIEDAFDLVGEVQEIVKTGKWVGDCFIYTNS
VNRLNYYVGGEIVTIAHLDRTLYLIGYIPKENRLYLGDKELNVVSYELLVSVLEYQTAVM
RRDFDTADRVLPTIPPAHRTRVAHFLEKQGFKKQALAVSTDPEHRFDLALSLGELDVCHQ
LALEAGSEHKWRLVADLAQQQGDLQTAQTCLLRAHDYPGLLLQATSTGNATLIKEVGSEA
ENQGRNNVAFLSYFLTGNLKGCLELLIKTNRVPEAAFFARTYLPGEMSRVVGLWKEAAGE
KIGQSLADPAQYDNLFPGFRDAVKTQHYLEKEAKPIPAASAASVPGNHERNPIEEMRAAE
AAGTFVYIPPEGEENQFVDAPSPTEALLQTQNLPGDELLLPSAPIDPVAAVPPDVSSEPL
MPSSSIPPSSSSPVPDSMIGETGVKGLEDTGFKGFKEKEAPFFDEPLGNRNEVSETEVDW
QNLSSASTLPTIPTQESLEVDSDLGADKVTQVIAPLEKNIIEQTAEAESDVKILSEIPEK
EMHGLGEKPWDSDDDFIEDNSSKMVLDPGLKDWDGEENLFDQNPSAKSREDPEMKDWDSE
ENLLDSKPSIKKLEDSGVKDWESDENLLESDSPLVCAQEEHEKDTLKPNVQLDEEDILGL
EDEANPESGAPLTVAAVGEAAVVSSLGSTRKFLDWDEDEAEDWGLEQKTVIDPRDQFLDC
FEDVSLEFHLEKKIHDSPQVGTPLVDISETKELVTPGLIKSLPSFAHCPAEPSSGFEKET
AHGGKIISVLDFPSEEPGITTCKSETVSAKSDAATFIPNMTPFGCEPPLMGLVAQPAKAF
SPRYNLAVDLKTDLVPPELAVDSRETAASLLELTDSPPELAGPVLEPSTNPFLGSGKPLL
ELDSISSWHHFEHCSTDPKRDTPKDQRNPFVGSGRSTIDQAQLERELELDLENVRIDDNI
DPNDVNLDEEDLLAD
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atgccattacgcttagatgtgaagcgtaagttgaccgcgaggtctgaccgtgtaaaatca
gtggacttgcatcctacagaaccatggatgctggcgtctctttataatggcaatgtccat
gtctggaatattgagagtcaacaactcgttaaaagctttgaggtatgtgatttgccagtg
agggcatctaagtttgttgcaaggaagaactgggtcataactggctcagatgacatgcaa
gtacgtgtcttcaattacaacacattggaaagagtacatcagtttgaagcccattcagat
tatgtgagatgcatagctgttcatccaactcagccatttatcctaacttgtagtgatgac
atgaccattaaactatggaattgggataagaagtggtcgtgccagcaagtgtttgaaggt
cactcacattatgtcatgcagatagtcattaacccaaaggacaacaacaccttcgcttca
gcctctttagatagaacagtcaaggtttggcagttaggttcacctcagcctaactttact
ctagaaggccaccagagaggtgttaactgtgtagattattatcatggtggtgacaagcca
tatctcatttcgggagctgatgacagtttggtgaagatttgggattaccagaacaaaact
tgtgtgcagacccttgaaggacattcacaaaatgtatcttctgtttcattccatcctgag
ctgcctatcattctcacggggtcagaggactgcactgttcgagtatggcatgtcaacacc
taccgattagagagcactttgaactatggtttagacagagtttggtgcatcagctcctta
aaaggatctaacaatgtctgctttggatatgatgagggtagtgttatgattaagcttggg
cgtgaggaacctgcaatgtctatggatgtcagtggtaagattgtgtgggctcgccactca
gagattcaacaggcaaatctgaaagctatgggagagactgaaattcttgatggcgaaaga
cttccgttagcagtgaaggacttgggtgcttgtgatatctaccctcagactattgcacat
aatccaaatggaagatttgtagttgtctgtggtgatggcgaatacatcatctacactgca
atggcactgcgaaacaaggcttttgggcctgcactcgaatttgtgtgggcgctcgactct
tctgaatatgccattagagaatccaactttgttgtcaagctcttcaagaacttcaaggaa
aagaagtcattcaagccagagtttggttgtgaagctatctttggtgggtatttgctggga
tgtagatctagtgccaccggccttgcattctacgactgggaaacacaagagcttgtccgt
cgcattgaaattcagccacgtcaagttttctggtcagagaatggggactatgtttgcatt
gctaccgatgaaaactacttcatcctgaagtacagttctgaggcagttgctaatgccagg
gataacaaggagaatgtaacagaagatggcattgaggatgcctttgatcttgttggtgag
gttcaggagattgtgaagactggcaagtgggttggagactgcttcatctatactaattca
gtcaatcgccttaactactatgttggtggagaaatagttacaatagcacatttagacaga
acattatatttgataggctacattcccaaagaaaacagattatatcttggagacaaagaa
ctcaacgttgtctcatacgagttgctagtgtcagttttggagtaccagacagctgtaatg
aggcgagattttgataccgcagaccgtgttcttcctacaatcccccctgctcatcgcaca
agagtagcacattttctagaaaagcagggattcaagaaacaggctttggctgtatccaca
gatcctgaacacaggtttgacttggcattgagccttggcgagttggatgtgtgccaccag
ctggcacttgaagcaggatctgagcataagtggagattagtggctgaccttgcccagcag
cagggcgatttgcagacagctcaaacttgtttacttcgtgcacatgactaccctggtcta
ctacttcaagctacatcaacaggaaatgccacactgatcaaagaagttggcagtgaagca
gaaaaccaaggcagaaataatgttgctttcctttcatacttcttgactggtaacttgaag
ggatgcttggagctcctcatcaaaactaatcgtgtaccagaggctgcgttctttgcaaga
acctacctgccaggggaaatgtcacgcgttgtgggactctggaaagaagctgctggagag
aaaataggccagagtttagcagatcctgctcagtatgacaacttatttcctggcttcaga
gatgctgtcaagacccaacactacttagagaaagaagccaagcccattcctgctgcgtcg
gcagcatctgtgcctggtaatcatgagcggaaccccatagaagaaatgcgtgccgcagaa
gctgctggaacttttgtatacatccctccagaaggcgaagaaaatcagttcgttgatgct
ccatcacccacagaagctttattacaaacacaaaatctacctggcgacgaactcctgctc
ccatctgcacctatcgatcctgtcgctgctgtgccgcctgatgtgtcctctgagccttta
atgccttcatcttctataccaccatcttctagttctccagttccagattctatgattggt
gaaacaggcgtcaaaggattggaagatacaggcttcaagggatttaaggaaaaagaggca
cccttttttgatgagcccttgggtaacagaaatgaagtatcagaaactgaagtggattgg
cagaacctgtcaagtgctagcactctccccactattcccactcaggaaagcttagaggtt
gacagtgatttgggtgcagacaaagtaacccaagtcattgctcctcttgaaaagaacata
atagaacaaacggcagaagcagagagtgatgtcaaaatcttgagtgaaattcctgaaaaa
gaaatgcatggattaggagaaaagccttgggacagtgacgatgatttcattgaagataat
tcgtctaaaatggtattagatcctgggttgaaggattgggatggtgaagaaaatcttttt
gatcaaaatccttctgccaaatctcgagaagatcctgagatgaaagactgggatagtgaa
gaaaatcttcttgacagtaagccatccataaagaagttggaggactctggggtaaaagat
tgggaaagtgatgagaatctgctggaatctgattctcccttagtgtgtgcacaggaagag
catgaaaaagatacattaaaaccaaatgtgcagcttgatgaagaggatattttaggttta
gaagatgaagccaaccctgaatctggagcacctttaacagtagcagcagtaggagaggct
gctgtagtatcgtccctaggttcaacaagaaagttcttagactgggatgaagatgaagca
gaagactggggtttggagcaaaagactgtgatagatccccgagatcaatttttggactgt
tttgaagatgtttcccttgaattccacttggagaagaaaattcacgactctccccaagta
gggacccccttagttgacattagtgaaacaaaggaactggttactccaggtttaatcaag
agcttgccatcattcgcacattgcccagctgaaccttcttcaggatttgaaaaagaaaca
gctcatggtggtaaaattatctcagtgcttgacttcccttctgaggaacctggcattact
acttgcaaatcagaaacagtttctgcaaagtctgatgctgccacttttattcctaacatg
accccatttggatgtgaaccaccacttatgggattagttgcacaaccagctaaagcattt
tctcctcgatataaccttgcagttgatttaaaaacggacttagtacctcctgaattagct
gttgactcgagagaaactgctgcatctcttcttgaattaactgatagtcccccagaatta
gctgggcctgtccttgagccttcaaccaacccatttttaggctctggaaagcctcttttg
gaacttgattctatatcatcatggcatcattttgagcactgttccaccgatcctaagaga
gataccccaaaagaccaacgcaatccttttgtaggtagcggaagatcaactatagatcaa
gcacagctggagagagaattggagttagacctggaaaatgttcgaattgatgataatatt
gatcctaacgatgtgaatttggatgaagaggacttgttggctgattaa
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integrated database retrieval system
