Macrobrachium rosenbergii (giant freshwater prawn): 136854091
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Entry
136854091 CDS
T10429
Name
(RefSeq) protein CASC3-like isoform X1
KO
K14323
protein CASC3
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03013
Nucleocytoplasmic transport
mrj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136854091
03015 mRNA surveillance pathway
136854091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrj03019
]
136854091
Messenger RNA biogenesis [BR:
mrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
136854091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
136854091
NCBI-ProteinID:
XP_066986348
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All DBs
Position
28:17640857..17719362
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AA seq
822 aa
AA seq
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MAERRRRRKVQSGEDSEELSDDSDEEHLPGQRKSLAGSDGGESEYESADDEELGEEEEEE
DDELLIMPDGVGIGDENKQLDDDEDRKNPQYIPKKGTFYEHDDRTAAEEDVEKPPEEPTV
KKEASKKKVWKEDNKWNHDKFNEFDQAPKTREELIAVYGYDIRNEEGPPRARRRRRYGRG
PNKYTRNWEDLDAYAKPVRGGTVRGGGPGRGGNRSLAGSKKALYNNEEFPALNSTQQKHQ
GGEQDDHRSGAEHHSPKNDIQRAPGDEHLIIDNDASKMQQQQQQMQMQHQHNLQNRNSIS
SPQFQELKIDNMGGRGRGGKGRGRGSGRGLNRDQHRHNDERSANNHDMHPGGRGNRGGYQ
QKGPVQHQTHVDEITLDMKNVNINTQNRDERHKKSRGGGNAENRRNTVPPRLQESAAAAA
NLHGRGRGGNSSPGGDGSASSRPKRYSSQRQRSIPDQPVPPFQQQQGYIDPALEAGYQGG
VYEGGVNPATSHTVSAPPSQLPIAGGAPHSFVPPAFTSPPTFPPEPFLGRPPAPRMFPPV
TQSPHLFTGGPLGAPPVGAPPVPPGPPVTGPPFIPHEINYAAHPGPQPGPHAGPLPGASP
LAGPHPPQFPPFQGFTPGPVSQPGEIYSNGVTYYNTESQQQLPRNNVPLQKRPKAAIPIV
PPPEREQRQDGSFSRVEGIQDDQQFVDSTNVPESALQESSEKEIPVETDSNLREDQQVVN
EGQVERQSEDQAATTEEGQQVESVADPKVTEEPASKSPENAAVQDKPETNVQPKESELSE
TLQKPEENSIDILESKDPEKEKASEGQPVEELKTTDGSVEAS
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggcggagagaagacggagaagaaaggtacaaagtggggaagattcggaggaactatcc
gatgattcagacgaggagcaccttcctggtcagcgaaagtctcttgcgggaagtgatggc
ggagagagtgaatatgagagtgctgatgatgaagagcttggtgaggaagaggaggaggaa
gatgacgaacttctcatcatgccagatggagttgggataggggatgagaacaagcagctg
gatgatgatgaggatcgaaaaaatccccagtacatccccaagaaaggcactttctacgaa
cacgatgaccgaactgcagctgaggaagatgtagaaaaaccgcctgaagaacctactgta
aagaaggaagccagtaagaaaaaagtgtggaaggaagataacaagtggaaccatgacaaa
ttcaacgaatttgatcaggcccccaaaactcgtgaggagctcattgctgtgtatggctat
gacattagaaatgaggaaggccctccacgtgctcgccgtagacgtcgttacggccgtgga
cctaataagtatactcgcaattgggaagatcttgatgcgtatgccaaacctgtcagagga
ggaactgtccgaggaggagggcccggaagaggaggaaacaggtccttggctggtagcaag
aaagctctgtataataatgaggagttcccagctttaaattctactcagcagaagcaccaa
ggtggtgaacaggatgatcacagaagtggcgctgaacatcattcacctaaaaatgacatc
cagagagctcctggagatgaacatttaataattgacaatgatgcatcaaaaatgcagcag
cagcaacagcaaatgcaaatgcagcatcagcataatctacagaataggaattctatatca
agtccccagttccaagaattgaaaattgacaacatgggtggacgaggacgaggaggaaaa
ggcagaggtagaggctctgggagaggattaaacagagaccaacataggcataatgatgag
agaagtgcaaacaatcatgacatgcaccctggaggacgtggaaatcgtggtggttaccag
cagaaagggccagttcagcatcaaacacatgttgatgaaattacattagacatgaagaat
gtaaacataaatactcaaaatagagatgaaagacataagaaaagtagaggaggtgggaat
gcagagaatagaagaaacactgtaccgccacgactgcaggagtctgcagcagcagcagct
aatcttcatggcagaggacggggtggtaattcctcaccaggaggagacggttctgcttcg
tctaggccaaagagatattcatctcagagacaacggtcaattcctgaccaaccagtgcct
cccttccagcaacagcaaggatatattgatccagcactggaagccggttatcagggagga
gtgtatgagggaggggtgaacccagccaccagccacacagtatcggcacctccctcccaa
ctcccaattgctggtggtgctccccattcctttgttccaccagcctttacctctcctccc
acttttcctccagagccattcctggggagaccaccagcgcctcgcatgttcccgccagtc
acgcagtcacctcatctcttcactggtggtcctctaggtgctcctccggtgggtgcaccc
cccgtcccacctggtccccctgttactggtccaccatttataccccacgaaattaactat
gctgctcaccctggcccccaacctgggccacatgcaggccctctcccgggagcatctccg
ttagcaggcccccacccacctcagttcccgccattccagggcttcaccccaggccctgtg
tcacaacctggtgaaatatacagcaatggtgttacctattataatactgagagtcagcag
cagctacctagaaacaatgtacctctgcaaaaaaggccaaaagcagccatcccgatagtt
ccacctccggaacgagaacaaagacaggatgggtcattttctcgagtagaaggaattcaa
gatgatcagcaatttgtagactcgactaatgttcctgaatcagctctccaggagtcttca
gagaaggaaattcctgtagaaactgactcaaacctaagggaagaccagcaggttgtaaac
gaagggcaagttgagagacaaagtgaagatcaggctgctacaacagaggaaggacaacag
gttgagtctgttgcagaccctaaagttacagaagaacctgccagtaaatcaccggagaat
gctgcagtacaggacaaacctgaaacgaatgtccagcctaaagaaagtgaactgtcagag
acactgcaaaaaccagaggaaaatagtatagatattcttgaaagtaaagatcctgaaaag
gaaaaagctagtgaagggcagccagtggaagaattaaaaactactgatggctctgtagaa
gcatcttaa
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