Macrobrachium rosenbergii (giant freshwater prawn): 136854226
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Entry
136854226 CDS
T10429
Symbol
Caper
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mrj03041
]
136854226 (Caper)
Spliceosome [BR:
mrj03041
]
Common components
Common spliceosomal components
General mRNP proteins
136854226 (Caper)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
Nup35_RRM_2
RRM_7
Motif
Other DBs
NCBI-GeneID:
136854226
NCBI-ProteinID:
XP_066986680
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All DBs
Position
3:34092782..34113005
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AA seq
558 aa
AA seq
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MKSDMGDFELDVDAMLEAPFKKEEDAASSLADSKPRENGHTSSRDRKEDRERDREKDRGK
DKDRDRDRDRGKDRDRERDKDREKNKDKEREREKDRKRRSRSKSRDRDRKRRTRSKSHER
DRKKRSRSRSRDRRRRSRSREKKRKSRSRDRRRSRSRSKERRRSRSRSRDRRRRSRSRDR
RHSRSRDHRRSRSRSKTPKQELSVEERDARTVFCMQLSSRIRSRDLEDFFSVVGKVNDVR
IITDAKTRRSKGIAYVEFVDVESVPLALGLSGQKILGVPIVCQPTQAEKNRAASIAAVQD
QKAASGPMRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLIMDSETGRSKGYGFITFHNSD
DAKKALEQLNGFELAGRPMKVNHVTERSETQQGTSLLDSDEMERAGIDLGATGRLQLMAK
LAEGTGLQLPAAAANALHMPAQPQQTPAPPIATQCFLLSNMFDPSTESNPNWAEEIRDDV
LEECSKHGGVLHIFVDRQSAQGNVYVKCPTIATAAASVSSLHGRWFSGRMITAAYVPVMS
YHSLFPEAMTSTQLIFPR
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctgacatgggagattttgaactggatgttgatgcaatgttagaagctcccttc
aaaaaggaagaggacgcggccagctccttagcagactcgaagcccagagaaaatggacat
acttcttccagagataggaaagaagatcgagaacgtgaccgggaaaaagaccgtggaaag
gacaaggatagagatcgagacagagatcgtgggaaagacagggatcgggaaagagataaa
gacagagagaagaataaggacaaggaacgtgaacgagagaaagaccgtaagcgacgatct
cgcagcaaatctcgtgacagagaccgtaagcgaaggacacgtagtaagtcacatgaaaga
gacaggaagaaacgttctcggtcaaggtcacgggatcgtaggcgtaggtctcgatcaagg
gaaaagaagagaaaatcaagaagcagagacagacgtcgaagcagaagtcgcagtaaggaa
cgtcgcaggagtaggagccgcagcagggacagacgccgtaggagccgaagcagagaccgc
cgccatagtcgcagtagagatcataggcgttcacgaagcagaagtaaaactcctaagcag
gagttgtctgttgaggaaagggatgcacgaactgtgttttgcatgcagttgtcatcacgc
attcggtcgcgagaccttgaggatttcttttcagttgttggaaaagtcaatgatgtacgc
ataatcacagatgccaaaaccagaagatccaaaggcatcgcttatgttgagtttgttgat
gtggaatcagttcccttggctttggggttatctggtcaaaagatccttggtgttcccatt
gtatgtcaacccactcaagctgagaagaatcgtgctgctagcattgcagctgtgcaagac
cagaaggcagcatcaggcccaatgagactttatgttggatctttgcacttcaatataaca
gaagatatgcttaggggaatatttgaaccttttggaaaaattgaccacattcaattaatc
atggactctgaaacgggcagatccaaaggatatggctttattacattccataattcagat
gatgccaagaaggctttagaacaactcaatgggtttgagttagcaggtcgaccaatgaaa
gtcaaccatgtgacagaaagatcagaaactcagcaggggacttcactcttagattcagat
gagatggagagagctggcattgatcttggtgctacagggcgtttgcagttgatggctaaa
ctagcagagggcacagggttacagcttccagctgctgctgccaatgcccttcatatgcct
gcccaaccacagcagacccctgcaccaccaattgccactcagtgtttccttctgtccaac
atgtttgatccttccacagagagtaatcccaattgggcagaagagatcagagatgatgtc
ttagaggagtgcagcaagcatggaggtgttctgcacatatttgtagacaggcagtctgca
cagggaaatgtttatgtcaagtgtcccactatagccactgcagcagcatctgttagttcc
cttcatggacgatggttttcaggtcggatgattacagcagcttacgtgccagttatgagc
taccactccttgtttccagaggccatgaccagcacacagctcatatttccccgatga
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