Macrobrachium rosenbergii (giant freshwater prawn): 136854373
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Entry
136854373 CDS
T10429
Symbol
iav
Name
(RefSeq) LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily V member 5
KO
K04975
transient receptor potential cation channel subfamily V member 6
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mrj04040
]
136854373 (iav)
Ion channels [BR:
mrj04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
136854373 (iav)
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GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_3
Ank_5
Ank_4
PKD_channel
DUF3868
Motif
Other DBs
NCBI-GeneID:
136854373
NCBI-ProteinID:
XP_066986775
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Position
29:complement(4948194..4993338)
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AA seq
1098 aa
AA seq
DB search
MGACATKKVAINPGAALDQVISQASSDDCVLYRLADYKKGGRLIEEYARGGGKEVERLIL
EEFGVFMYNHGRGKEITRTEYLKWKYRNVPKDQMVVQMETKTPFNPLNKWADHEACWQMQ
FRGSLGETLLHVLIMCDTKAHTRVAKILLKCFPKLAVDVVEGEEYLGASALHLAIAYSNN
ELVTILVQCGADFRQRAIGSFFLPKDQQVTDPPGPENTEYEGLAYLGEFPLAWAACLGNE
TVYNKLIDFGADPNLQDSFGNMILHMVVVCNQLGMFSYALRHPRNPAQDGIMNMAGLTPL
TLACKLARSTIFKEMLELTCIEFWRYSNITCSAYPLNALDTIRPSGETNWNSALMIILNG
TKSEHLDMLEGGIIQRLLEEKWKTFARNQFLKRLAIMLLQLILLSFSVYLRPCYCGPINM
KMNDSAVRDKLWQEFFEGDFSNIARYCFEAGTLAGVISYTIFQXGEEIMNQGLSSYIKGT
IANVPKFIFLVSNLMIMLCVPCRVIYFFTPERDPVFRVLEDELLAYAVAGSWFMMMFFAG
ALKLTGPFVVMIYKMISGDMFTFSIIYGIMLLGFTEAFYFLYKSPTQDPASKWSTYGSTW
MALFHMTLGDYDYTSLNSNIYSAMSKFVFLVFTIMVPIMLLNMLIAMMGNTYSTVISMSE
KEWVKAWAKIVIALERAVSQEKLKDYLYMYSLPLGGGADGGEEALGVMVIKCKDKTKAKQ
RKGALSNWKRVGRVTIDALHRRGVSGEFLRREMWGLQTAASTPVKGPSKKKGGGGLLGIS
SGPDTVDIMGDALTQSMFAGDADPMNEHDGIGALTGAIDQLAFTNDLDFSGDGVDDDPMK
VITPASGEGNAGPKPDAPEEKKKKKKRRDSNGYDNPAFLDDEELLLAAALGTTGGESEDT
DEEDMLESRRLAQPRIIIQAETDTASITDPTKIKSKAPTAAAKDPKAAAAAAAGAKATPP
AQPDVNALTRPRLPSAKIRRIGSARKTPARFTMTFDKKLPGSEDSGDGEKWAEKKPRRKN
QVAPSSSSEDNEEVRTQDDLNVGLQSGTDNTREELMAKEKLERPKTSVASEKMKKRATDE
VGNMNSILPWDNEDGDIK
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcatgcgcgacgaaaaaggtggccatcaacccaggggccgctctagatcaggtc
atctctcaggcgtccagcgacgattgcgttctgtacagacttgctgattacaagaaaggc
ggtcgactgatcgaagaatatgcacggggaggagggaaggaggtggagagactgattctc
gaggaattcggagttttcatgtacaatcacggaagaggaaaagaaattaccaggacggaa
tatctcaagtggaaatatcgcaatgtccccaaggatcagatggtcgttcagatggagacg
aaaacgccgtttaacccgctcaacaagtgggccgaccacgaagcctgctggcagatgcag
ttccgggggtccttgggcgagactcttcttcacgtgctcatcatgtgtgacaccaaggca
cacaccagggtggccaagatcctcctcaagtgtttcccgaagctggctgtcgacgtcgtg
gaaggagaggagtacttgggtgcaagcgccctccatttggcgatagcttactccaataac
gagctggttacgattctcgtccagtgtggtgcggactttcgtcaaagagccattggtagc
ttcttcttgccgaaagaccagcaggtaacagatcccccggggcctgaaaatacggaatac
gagggactggcgtacctgggggaattccccctagcttgggctgcctgcctggggaatgag
actgtctacaataaactcatagatttcggagcagaccccaatctccaagattccttcggc
aacatgatactgcatatggtggtggtctgcaatcagttgggaatgttttcctacgcccta
cggcaccccagaaaccctgcgcaggatggcatcatgaacatggccggcctcacccctctg
actctagcttgtaaactggcgcgttctaccatcttcaaggaaatgctggagctgacctgt
atcgagttctggaggtattccaacatcacctgcagtgcttatccactcaatgctctggac
accattcggcccagtggagaaacaaactggaattcagccctgatgattatcctgaatggt
accaagagcgaacatctggatatgctggagggtggcatcattcagagacttcttgaggag
aagtggaagacctttgccaggaatcagttcctgaagcgcctggccatcatgttgctacaa
ctcattctcctgagtttctctgtctacctccgtccttgttactgcggtccgatcaacatg
aagatgaatgactcggccgttcgcgataagctgtggcaggaattcttcgagggcgacttt
tcgaacatcgcccgatactgcttcgaggccgggacgctggcgggagttatatcctacacc
atattccagncaggggaggagatcatgaaccaaggactctcctcctacatcaaaggaacc
atcgccaacgtccccaaattcatcttcctggtctccaacctgatgatcatgctatgcgtc
ccttgcagagtcatctacttcttcactcccgagagggatcccgtcttcagagtcctcgag
gacgaactgctcgcctacgcagtggctgggtcctggttcatgatgatgttcttcgccggg
gccctgaagctgaccggccccttcgtggtcatgatctacaagatgatctcgggtgacatg
ttcaccttctccatcatctacggcatcatgcttctgggattcaccgaagccttctacttc
ctctacaagagtcctacccaggatcctgcttctaaatggagcacctacggctccacgtgg
atggccctgttccacatgaccctgggtgactatgactacacttcactgaacagcaacatc
tacagcgctatgagcaagttcgtgttcctcgtgttcaccatcatggtgcccattatgttg
ttgaacatgttgatcgctatgatgggcaatacttacagcaccgtcatcagcatgtcggag
aaggagtgggtcaaggcgtgggcgaaaatcgtgatcgcactagaacgagcggtttcgcaa
gaaaaactgaaggattacctgtacatgtatagtctgcctctcggcgggggcgctgacgga
ggtgaggaagcccttggggtcatggtcatcaagtgcaaagataagacgaaggctaagcag
aggaagggtgccctcagtaactggaagcgtgtgggtcgcgtgaccatcgacgccttacac
agaagaggcgtgagcggggaattccttcgccgagagatgtggggactccagaccgcagct
tccacgcctgtgaaaggaccgtcgaagaagaaaggtggaggtggtctccttggtatatcc
tcaggccctgacactgttgacatcatgggagatgccttaacccagagcatgttcgcagga
gacgccgatcccatgaacgaacatgacggaatcggagcacttacgggtgctattgaccaa
ctggccttcacaaatgacctcgatttctctggagatggtgtagatgacgatccgatgaag
gtgatcactccagcttctggagaagggaatgcagggccaaagcctgatgcccctgaggag
aagaagaagaagaagaagcgcagggattcgaatggctacgacaatccagccttccttgac
gatgaggaattgcttcttgcagcagccctcggaacgactggaggagagtctgaggacaca
gacgaagaggatatgctggaatctcggcgacttgcgcagcctcggatcatcattcaggct
gaaacagacaccgcgtctatcacagaccctacaaaaattaaaagtaaggcccccacagct
gctgctaaagatcccaaagcagcagcagcagcagcagcaggagcaaaggccactcctcct
gcccagccagatgtcaatgccttgactagaccacgcctgccctctgctaaaatccgaagg
attgggtctgcccggaagactcccgctcgatttaccatgacctttgacaaaaagcttcct
ggatctgaggacagtggagatggggagaaatgggctgaaaagaaaccaagaagaaagaac
caagtggcgccttccagcagctcagaagataatgaggaggtcaggacgcaagatgacttg
aacgtcgggctgcagtctggaacggacaacacacgagaggagctgatggcaaaggaaaaa
ctggagagacccaagacgtcggtcgctagtgaaaagatgaagaaacgggcaacggacgag
gtggggaacatgaacagcatcttaccctgggacaatgaagatggagatatcaaataa
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