Macrobrachium rosenbergii (giant freshwater prawn): 136854535
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Entry
136854535 CDS
T10429
Name
(RefSeq) WD repeat-containing protein 46
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mrj03009
]
136854535
Ribosome biogenesis [BR:
mrj03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
136854535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_WDR5
WD40_WDHD1_1st
EIF3I
WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
B-prop_COPA_B_2nd
eIF2A
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
136854535
NCBI-ProteinID:
XP_066986980
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Position
29:complement(5855218..6001711)
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AA seq
583 aa
AA seq
DB search
MEDSPSMQNSNTSGESQGKDFKWQKRKGHWHAVKVETKDGVKIKEFTHDPKSRPRKFPRD
RPQKFPGRKPLDPSLQQKYSRGGGVETSYVRNPKHRVMKNKLKKREAKIKEAEEETARAE
ILLTESAGIMETEEGSYTANVTQRDIRNSVDITTAAKGFELVLKDFGPYKMHFTRNGRHL
LLGGRKGHLAAFDWITKKLHFEINVMESIHDICWLHTEHMMAVAQKKWVYIYDNQGVELH
CLKKLAHVHKLEYLPYHFLLCTAGETGFLNWLDISLGQELLTIQTGKGRLEVMRQNPYNA
VICCGHSNGTVTMWTPNEKEAVASVLCHGSPVRAIEFDPAGRHFVTAGVNRELKIWDARN
LGDCMYTYKIRMGASTLAFSQKQMLAVGMGNVVEVYDRVTKGGFSWPYMHYDCKNSVTGM
QYCPYEDILGVSTYKGYSSLIIPGAGEPNFDALEANPYLSVSGRREAEVKSLLGKVPYGL
ITLDPSSIAQVDVPTLEEKLEAKKALKYVRVPKVDVEPRYRMKGKSGSAQKFKRKQKTVD
IKKREYIRNAVIARDELGLKEEKQTKPKKSFGLLDRFHTKVQK
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggaagattcacccagcatgcagaactccaatacatcaggagaatcccagggaaaggat
ttcaagtggcaaaagagaaaaggtcactggcacgctgtgaaggttgaaacaaaagacgga
gtcaagatcaaagaattcactcacgaccccaagagccggccacgcaagttccccagggat
cggccacaaaaatttccgggacgcaaaccactggatccgtcgctacagcaaaagtacagc
aggggaggaggcgttgagaccagttatgtccgaaatccaaagcacagggttatgaaaaac
aaactgaagaagagggaggcaaaaataaaggaggctgaagaggaaacagctcgagctgaa
atccttctaacagaatcagctggaattatggagacagaagaaggatcatacacagcaaat
gtcactcagagagacattaggaattctgttgatattaccacagcagcaaaaggctttgag
cttgttctgaaagattttgggccttataaaatgcatttcacccgcaatggtcgacacttg
ttattaggtggtcgtaaaggccacttagcagcatttgactggatcacaaaaaagttacat
tttgaaataaatgtaatggagtcaattcatgacatatgctggcttcacacagaacacatg
atggctgtggcacaaaagaagtgggtgtatatttatgacaatcaaggagttgagttgcat
tgtctgaaaaagttagcccatgtccataaactggagtatttaccgtaccacttcttactt
tgtaccgcaggggagactggatttcttaattggctcgatataagtttgggccaagaatta
ctaacaattcaaacaggcaaaggaaggctggaagtcatgcggcagaatccctacaacgcg
gttatatgttgcggccattcaaatggcacagtgacgatgtggacgccaaatgaaaaagag
gcagtggcctcagttctttgccatggcagtcctgttcgtgccatagaatttgatccagct
ggcaggcactttgtaactgctggggttaaccgggagctgaagatttgggatgcacgtaat
cttggagattgtatgtacacttataaaattcgcatgggtgcatcaacgctagccttttct
cagaaacagatgcttgctgttggtatgggaaatgtcgttgaggtctatgacagagtaacc
aaaggagggttctcttggccatacatgcactatgattgcaaaaattcagtcactggtatg
cagtattgtccatatgaagatatcctgggagtgtccacgtataaaggctactcaagcttg
attattccaggtgctggtgaacctaactttgatgctttagaagcaaatccgtacctgagc
gtaagtggacgcagagaagcagaggttaagtcccttcttggaaaagtgccttatggactc
attactttggatcccagtagcattgctcaggttgacgtaccaacattggaggaaaaatta
gaagcaaagaaggctttgaagtatgtacgtgtaccaaaagtggacgtggagcctcgttac
cgaatgaaaggaaagagtggctctgctcagaagttcaaacggaagcagaagacggtcgat
attaagaaacgtgaatatatcaggaatgcagttattgccagagatgagttaggtttaaaa
gaagagaaacagactaagcctaaaaagtcttttggtcttcttgatcgctttcatactaaa
gtgcagaaataa
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