Macrobrachium rosenbergii (giant freshwater prawn): 136855044
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Entry
136855044 CDS
T10429
Symbol
Bap170
Name
(RefSeq) AT-rich interactive domain-containing protein 2 isoform X1
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
136855044 (Bap170)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mrj03000
]
136855044 (Bap170)
03021 Transcription machinery [BR:
mrj03021
]
136855044 (Bap170)
03036 Chromosome and associated proteins [BR:
mrj03036
]
136855044 (Bap170)
Transcription factors [BR:
mrj03000
]
Eukaryotic type
Helix-turn-helix
ARID
136855044 (Bap170)
Transcription machinery [BR:
mrj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
136855044 (Bap170)
Chromosome and associated proteins [BR:
mrj03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
136855044 (Bap170)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
136855044
NCBI-ProteinID:
XP_066987907
LinkDB
All DBs
Position
30:complement(13375226..13461730)
Genome browser
AA seq
1824 aa
AA seq
DB search
MSKDVNKDAEAYDREYDAFIKQLEDFHQQRGTPFRRLPRINGKGVDLYLLYVVVTARGGW
QKVNARAEWEDILEDFRLPPGCINSSTALKHIYIRYLDAYERVNFLGEDGEDRGTEMDEG
EDSRSMRTKRTIRSLNNVPLSYNHQQHNVHDTLRYGAGLSADLYKASSYDKLALSLISPL
PNEHDFAFNVCTILSNEGRHVLQLSQCPRLVEHMLGHTGVYKDWETQKYFLTNYKETRGR
SLVQFWIDSVKDRSVLDLLIPETFDKPTNRPIEASKDCSSEHNTSGAIETSNTLNLSSES
LANFDNENFLCCDTLEKISNSTCVANEASISLAKRVDSGSYDNLENAECGRLALDATAQA
LKKETILRRLEKVLECEGSDLKLLKEDGEIFHLGRDHGVQDAEGSRISQILHIIRNLSFE
EQNVACLAKSHTCLRFLVLCMCSQWGGLAVNALDTLGNIVPEVTLRDPRIDSCSASLLEN
VCKGVASPDRAFILRSLEVLNKLAMNDPNEEILNNYIEPSVYSQICRYLTIHDIMLLIYT
LECLYSLSSLGTPACNAIVRAKGSIHTLISLLTVEAQSYGPEACIGMKVVETVTGVVSEP
EPNTTAASATSTSTSTTTTSATATHLASATSTAVTTPVTSATIATTPIVNKTVSKTTPGG
TATPGDAKKIASRIVPPEVEEFVIDWVRKNYEANAGNAIEQAIVYRHFAASMHAMGRKQG
LNPVLLSNCVRKVFGTGVGPSRRPVEDGSEKWHYNGIRRRDGIVVPPMPEKKPVKVGGAA
VPVFTPTPVLNTVNTINTQVSDIRINSPIVGTPQIVTAQAQPESNASPSSPILKAQLSAP
LRPSPPPPARQPQAMVSGTMSQGGYSSAQQSQTPPSPQQAQGSGRADNSALIKSLLANKV
TPVGVNQAGSMDSLHPSPHSRSVLVPSAPQPPPPPTPQQQQPQPQPQLQPQPQPQSQQQQ
QQQQLQQPRPPTATVSYVQALSQGPPGPQGPIHSPSSVGSNSGLQVVTGVVGGGGGTTPG
VFGVKGVVQGPRHQLTNPPVQVSRNLQKQLQQQPTDSSQDSSNDSQLRKTPFNGICNEVR
KCEDDSNSFHTAGANEKKVTSFEGILQNGIKSEDATIKEEELSLKVEDSSLKEEDTSVGE
NKTKKNVLADLLEKTVGGDILNGVVDRELRISDKGLEFVNHGQQLKINGPFTANGQTGVD
SPQVGGIKRPATPDNSPVKRMALEDPRGAAESDSRITLYVSQNGSESGEVISQGQQHQVV
ITQGQQPGNVAVSNASPQMVVSQTVLPSQQQVGTTQTVVTPQGQVILQRPAGTPTGVIVQ
QGGQIITQGSGAGQVIQQVIQGQSGQPQKVILHQGQLGQVIGGQVILSQGGGGQHQVVVQ
GGNNIQGQVIMQSVPHCQGQVFMQGSSAQSQFVVGGSQGQTVVVPGSQGQQVMVSSAQGQ
TMIVTGSQGQPVVVSGQQGASGQVVVPSNVGGTVLLTPHQQGSTAKTLIILPNPKMVLAG
SQHQSGQGQQLVLPRQVAGQQVVQVVSSGTTGPVATVTTAMRTIRTATPITDNRAVSTPP
PPVQHASANSNSSSSNSNFSVQTSANLPTAVAPAPAGPTAVPVSQTIVSQGPQTPHVPAP
QVLSSGVARRQAKPSGLQYLCEWRGCNRAFSSAAQVYHHACKIHCPPYVSELQCGWAGCD
TMTRRRFSAMTHLHDRHCNEQLLHILAVRRSQLASAGKTDIPIPQAPPPHPGYAPNAAFH
AIKRHALEVINHRDAVEKEGPVTKSIRLTSALILRNLVIYSNTGKKLLRGYESELSNVAI
STMESSRTVAQILYDISLPDHQGM
NT seq
5475 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaggacgttaataaggacgcggaggcgtatgacagggaatacgatgcctttatt
aagcaacttgaggatttccaccaacagagagggacaccattcagacgtctgcctcgcatc
aacggcaaaggagtcgacctctacttgttgtacgtcgtggtgaccgcccgaggaggatgg
cagaaggtgaatgcccgtgcagagtgggaagacatcctagaagatttccgtctgccgcca
ggatgcatcaattcttccacggccctcaaacatatctacataaggtacttagatgcctac
gagcgcgtcaacttccttggggaggatggcgaagaccgaggcaccgagatggacgaggga
gaggattcccgttccatgaggaccaaaaggaccatacgttccctcaacaacgttcccctc
tcctacaatcaccagcaacataatgtccacgacacactcagatatggtgccggcctgtca
gcagacttgtacaaggcttcttcatatgacaagttggcattgtcattgatctcaccccta
ccaaatgaacatgattttgcattcaatgtatgtaccatcctaagcaacgaaggtcgtcat
gtgttgcagctaagtcagtgtccacgattggtggaacacatgcttgggcacacaggagtg
tataaagattgggaaactcaaaagtattttttaaccaattataaggagactagaggcagg
agtttagtgcagttttggatagactctgtgaaagacagaagtgtcttagacttgctaatc
cctgaaacgtttgataaaccaacaaacaggcctattgaggcgagtaaagactgcagttca
gaacataacactagtggtgctatagaaactagtaatacattaaatttaagcagtgaaagt
ctggcaaattttgataacgagaactttctgtgttgtgatactttggaaaagatttcaaat
tctacttgtgtggccaatgaggcaagtatatccctggcaaaaagagtagacagtggaagt
tatgacaatttagaaaacgctgaatgtggaagacttgcattagatgcaacagcacaagct
ctcaagaaggaaaccatactcagaaggctagagaaggtgttagaatgtgaagggagtgac
ttgaagttattgaaggaagacggggaaatttttcacctgggccgtgaccatggggtgcag
gatgctgaaggttcacgtataagtcaaatcctccatatcatccgaaatttatcctttgaa
gaacaaaatgtggcgtgccttgcaaagtcacatacttgcttaagatttttagtcttgtgt
atgtgctcacagtggggtggtttagcggtgaatgctttagatacattgggaaacattgta
cctgaggtaacactccgtgatccaagaatagattcctgctctgcttcattgctggaaaat
gtttgcaaaggtgttgcatcaccagatagggcattcatcttacgatctcttgaagttctt
aacaagttggctatgaatgatccaaatgaggagatattgaataattacatagaaccatct
gtttatagtcaaatatgtcgatacctaacaatccatgacataatgttgctgatttacaca
ttggagtgtctgtactccttgtcatcattgggtactcctgcttgtaatgccatagttcga
gccaagggatctatacatacacttatttctttgctgacggttgaggcgcagagttatggt
cctgaggcttgtattggcatgaaggttgttgagactgtgactggtgttgtgagtgagcca
gagcccaatacaacagcagcatcagcaacttccacttctacatctaccacaacaacttcg
gcaactgcaactcacttagcatcagcaacgtccacagcagtcaccacccctgtaacatcg
gccaccatcgccactacacccatagttaacaagacagtcagcaaaactaccccaggaggt
actgccaccccaggagatgccaaaaaaattgccagcagaatagttccccctgaagtggaa
gagtttgttattgattgggtaaggaaaaactatgaagcaaatgctggcaatgcaattgag
caggctattgtttacagacactttgcagcctcgatgcatgccatgggccgtaagcaaggg
ctcaatcctgtgctcttatcaaattgtgtgaggaaagtgtttggaacaggagttggtccc
agccgtcgaccagtcgaggatggctcagagaaatggcactacaacggtataagacgacgt
gatggaatcgtcgtcccaccaatgccagagaagaagcctgtgaaagtcgggggtgctgca
gttcctgtgtttacacctacacctgttttaaatactgtcaatactatcaacacacaggtg
tcagacattcgaattaattcccccattgtgggtaccccacaaatagttactgcacaggca
caacctgaatcgaatgcttctccgtcttctcctattctaaaggcacaactctctgcccct
cttagaccgtccccaccaccaccagctagacaaccacaggccatggtgagtggtaccatg
tctcagggtgggtatagcagtgcacagcagtcccaaacccctccgtcacctcagcaagcg
caaggatctggcagggcagataattctgctcttatcaagagtttattggctaataaggta
actcctgtgggagtaaatcaggcaggcagcatggactcactccacccctcaccccactca
cgttctgtacttgtcccctctgcaccacaaccacctccaccaccaacacctcagcagcag
cagccgcagccgcagccgcagctacagccacagccacagccacagtcacaacagcagcaa
cagcaacaacagttacagcaacccagaccaccaactgcaacagtatcctatgtgcaggct
ttgtctcagggccccccaggcccacagggacccatacatagtccatccagtgtggggtca
aacagtggtttgcaggtagtgactggagtggtagggggaggaggaggaacaaccccaggt
gtgtttggagttaaaggggttgtgcagggaccaaggcaccagctgaccaacccaccagta
caggtgtcgagaaaccttcaaaaacagttgcagcaacagccgacagatagtagtcaagat
agcagcaatgactcacagcttagaaaaacaccctttaatggaatttgtaatgaggttagg
aagtgtgaggatgattcaaactcatttcatactgccggtgctaatgagaagaaggttacg
agtttcgaaggcattcttcagaatggaataaagtctgaggatgcaactataaaagaggag
gaactatctctgaaagtagaggattcatctcttaaggaagaggataccagtgttggtgaa
aacaaaactaaaaagaacgtgttggcagacttgttagagaaaactgtggggggagatatt
ttgaatggtgttgttgatagagagttaagaataagtgacaaaggattggaatttgtaaat
catggacagcagctgaaaattaacggtcctttcacagcaaacgggcagacaggagttgat
tccccacaggtcggtggaattaagagaccagcaactcctgataactcgcctgtgaaaaga
atggctttggaagaccctagaggtgctgcagagtcagatagtcgaatcaccttgtatgtc
agtcagaatggcagtgaaagtggggaggtaatttctcaagggcagcaacatcaggtagta
ataactcaggggcaacaaccaggaaatgttgctgtgagtaatgcttctccacagatggta
gtgagtcagacagttttgcccagccagcaacaagtagggacaactcagactgtagtaact
cctcaggggcaagttatcctccaaaggcctgcaggtacaccaacaggagtcatagtgcag
caagggggtcaaatcattacgcagggatctggtgctggacaggtgatccagcaagtgata
caaggacaatcaggacaaccccagaaagttatcttacaccaaggccagttaggccaggtg
ataggagggcaagtcattctctctcaaggaggtggcggacagcatcaagtggtggttcag
ggtgggaataatattcagggacaagttattatgcagagtgtgccacattgccagggacaa
gtgtttatgcaaggtagcagtgctcaaagccagtttgtagttggtggcagccaaggacaa
acagtggtagtgccaggtagccaaggccaacaagtgatggtttctagtgcacagggtcaa
actatgattgtaactggcagtcaaggccagcctgtggtggttagtggacagcagggtgca
agtggacaagtggttgttccaagtaatgtgggtgggacagtgcttttgacgccgcatcag
cagggctctactgcaaagacgttaatcattttaccaaatccaaagatggtgttggctgga
agtcagcatcaaagtggccaggggcagcagttggtgctaccaaggcaggtcgcaggtcag
caggtggtacaggttgtatcgtctggaaccactggacctgtagccacagtgaccacagcc
atgagaacaataaggacagctacacccataactgataatagagctgtatccactcctcct
cctccggtccaacatgccagtgcaaacagtaacagtagtagtagcaatagtaatttcagt
gttcagacatcagctaatttacccactgctgttgccccagctccagctggtcctacagct
gtcccagtgtcacaaacaatagtaagccaaggacctcaaacacctcatgtccccgctcca
caggtgctatcctcgggtgttgcccgccgtcaggcaaaaccaagtggcttacaatatttg
tgtgaatggcgaggttgcaatcgagcctttagtagtgcagcccaagtataccaccacgct
tgtaaaattcattgcccaccctatgtcagtgaattacagtgtgggtgggcgggctgtgac
actatgacaagacgtagatttagtgccatgacacatctacatgaccggcattgcaatgag
cagctactacacattcttgcggtgaggaggtcacagttagcgtcagcagggaagacagat
atccctatacctcaggctccacctccccatcctgggtatgcgcccaatgccgccttccat
gccatcaagagacatgctcttgaagttatcaatcacagggatgctgtggagaaggaggga
cctgtaaccaaaagtattcgtttaacctcggctttgatcctgagaaacctagtcatttac
tctaatacagggaaaaagttgttacgaggttacgaatctgagttatcaaatgtggctatt
agtacaatggaatcttctcgaactgtcgctcagatcttatacgacataagccttcctgat
catcagggcatgtaa
DBGET
integrated database retrieval system
