Macrobrachium rosenbergii (giant freshwater prawn): 136855120
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Entry
136855120 CDS
T10429
Symbol
Helz
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Brite
Messenger RNA biogenesis [BR:
mrj03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
136855120 (Helz)
3'-5' decay
Other 3'-5' decay factors
136855120 (Helz)
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Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136855120
NCBI-ProteinID:
XP_066988066
LinkDB
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Position
30:complement(19772541..19862660)
Genome browser
AA seq
1690 aa
AA seq
DB search
MEKAKNDRVESVSELNGNLSVPRNRNKNLRTTSGHSKPESPCLDPQEIQESRGYNKSVNM
KVQVSSKEKSPPLATRIHCSYCNVYFNTKVELQVHCRGQDHQTTIMSDEGRDWTHRPPPR
GLSAEEYALCSTFKDTHNCRLGDQCVGAHSDAELLEWQERFEYRAMKLERAKEKQLHGAS
YADQLLERLSQLQHQEALITEKSSGIITNMSMEPNLRVSQKPSQHEWVITLCPPSPLRVV
SLLHDAHRTHFSITEVAQIDNHRCIHKSCAPENNQEWISTDIESLAPVDHHPLEYKITVS
FKTAIYGTFRQAVIFDSGTEPVLMQRLCVDVIPVEDLNTLEETKNTILTRSERWCEENVK
IVTYEPKPHELSSHDKSILSSYPAPTNQNFVLTQTTMEKIPTRNNYKTRLHDLLHIEELA
QFDLMSRFNIKTTLQITNSYLLLPSAAATAKYSRPGELFGKLELSSEISEDSLHGRLVLS
NCNTILVAPISETPENGVPESNSEIKKPVRQVYEVLIEDKTKKEIYLRFSETAVTELQLG
DDEEVTVEVQFQLNRLPLCEMHAALDRIPTMDLIFPDVSTELTIPWNTKKQWGDNINNKL
NPKQREALLAITAPSDIILPPILIIGPYGTGKTYTLAQGIKQILLQQDTRILICTHSNSA
ADLYIKDYLHPYVLEGHEEARPLRIYYRNRWVNTVPQEVQQYCLIEMEQGCSKFKMPTED
EILKHRVVVATLNTSRHIVSLNLEKGVFTHILVDEAAQAMECETLTPLALVKPGTRLVLA
GDYMQLSPEVYSPFCEERGLGTSLLERLYDLYPVNSPCKIMLVENYRSHSAITKYTSDLF
YEGRLIASGKQAAHPKFYPLTFFTARGEDFQDPNSTAFHNNSEVYEVCEQVGEIVKHWPV
EEWGPIAEGSIGVVTPYADQMIRIRAELRKRKHHKISVERVLNVQGKQFRVIILSTVRTR
HTCKAGDDELDFGFLSNAKLLTTAITRAQSLVAVVGDPVSLCSIGKCRKLWEKFLQLCSE
AGSLYGITWSALRAQLDGVELKKTYVLNPLAPEFIPRYLYFSPLPSLPMVPTMPPYVNFF
PPYSSYMPAYPMHSVIGHHPVPYMPSAHIPPQWPAVRYGKPLMKPPPGRPAQQLVASHPL
RPPVTSTMAPPYIEAIGHDYLPVQPGFYSMYYPHCPPITHPITAIRPPPNIESYNRSAYI
SALPQTYHDIKQLTPPANLLHPIGFKSAHFGRSMPLPVPQPDHVIPQSEGDKSYQFLNNV
HFPERNLSSNPSAVSQSTRSRADTESPLSTHSRESSHSSNSDSRTSLRPQVQPISRPPPE
TKLHSGYSASFVAHQKQLDAQDQHPVQKRPSFPSYRQNGEVMSDESALPTPDVVRIIDDI
ISDRSPTKTTNHWHWGESEDGSKSDPIQDICQSPMDLWLGGNQPNRMRPSHSNAQHSSSP
SWLGASSNIGKIVTVQEVEAGLRKRQKAHELNIGSSSSLTAPQASTGLPATHASAGHSYF
HGDSENSRRGREGEEIKDVRSGRVDVPPPPGFSGLNRLVDPLTQLELRDVEPVGHRTPSI
PLYLRRGSRETSSMRGCNSPLSTQGSSSTNSSNSFVIGSSVWNSNSTDLHSSSSQGDASF
KDMSFLHSGGHSVGGQSQLTHNSNNKTYAGVLRSSLQQSPIDQNEESNYLLKDLTDKRHC
MSNHLYQYFP
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagctaaaaatgatcgtgttgaatctgttagtgaacttaatggaaatttaagt
gtacctagaaatcgaaacaaaaatttgcgaacgacatctgggcactctaaaccagagagc
ccctgcctagaccctcaagagatacaagagtcaagaggctataataagtctgtaaacatg
aaggtccaagtctcaagcaaggaaaagtcgccacctctggcgacacgcatccactgttca
tactgcaatgtgtattttaataccaaggtagagttacaagtccactgcaggggacaggat
catcagacaaccatcatgtctgatgaaggtcgagattggacccatcgacccccaccccgc
ggactcagtgctgaagaatatgcgttgtgttcgacgtttaaagacacacacaattgccgg
ttaggagatcagtgtgttggggctcatagtgacgctgagctgttggaatggcaggaacgg
tttgagtatcgggccatgaagcttgaacgtgcaaaagaaaagcagttgcatggtgcgtcg
tatgctgatcagcttttggagagactttcacaattgcaacatcaagaagcactgatcact
gagaagagttcaggaattataacgaacatgagcatggagcccaacttgcgtgtatctcag
aaacccagccagcatgaatgggtgataactttgtgtccaccatctcccttgcgtgttgtt
tctctcctccatgatgcacacagaactcacttttcaatcaccgaggttgcccaaattgat
aatcaccgctgtatacataagtcctgtgcaccagaaaataaccaagagtggattagtact
gatattgagtctttagcacctgttgatcatcatcctttagaatataaaattactgtttca
tttaaaactgcaatctatggtacctttagacaggcagtgatttttgatagtggaacagaa
cctgtacttatgcagaggttatgtgtagatgtgattcctgtagaagatctgaatacacta
gaggaaacaaaaaatacaattctcaccaggagtgagaggtggtgtgaggaaaatgtgaaa
attgtaacatatgagcccaaaccccacgaattgagtagtcacgataagagcattttatct
tcttatccagccccaaccaatcagaattttgtgttgactcaaacgaccatggagaaaata
cctaccagaaacaactacaaaactagattacatgatcttcttcatattgaagaattagcg
caatttgacttgatgtcaaggtttaatattaagacgactttacagataactaacagctat
cttctcttgccctctgcagcagcgacagccaagtattcacgcccaggagaactctttggg
aaattggagctctcctcggaaatctcagaggattctctgcatggaaggttagtcttatca
aattgtaacacaattcttgtggcgccaatatcagagactcctgaaaatggcgttcctgaa
agcaacagcgaaatcaaaaagcctgtgcgccaagtttacgaagtgcttatagaggacaaa
acaaaaaaggagatctatttaaggttttctgaaacggctgttaccgagcttcagttgggg
gacgatgaagaagtcacagttgaagtgcagttccagctgaacagacttcctctgtgtgaa
atgcatgcggcattagatcgtataccaacgatggatctgatctttcctgatgtctccact
gagctcaccattccttggaatacaaagaaacagtggggtgataacatcaataacaaactc
aaccccaagcagcgggaagcactgcttgcaatcactgctccatctgatatcattttacct
ccaatattaataattggaccctatggcactggaaaaacatacacgctagcacaaggtatc
aagcaaatcctcttacagcaagatacaagaattctgatttgtacccattccaacagcgca
gctgatttgtacattaaagattatctccacccttatgttctagaaggacatgaagaggca
aggcccttgagaatctattatcgaaatcgctgggttaacactgtacctcaggaagtgcaa
cagtattgcttgattgaaatggaacaaggatgttcaaagttcaagatgccaacagaagac
gagatccttaagcatcgagtggttgttgctacactgaatacctcaaggcatattgtttca
ttaaacttggaaaagggtgtgtttacccatatccttgtagacgaagcagctcaggccatg
gaatgtgaaactctaactccactggctttggtgaaaccaggaacacgtttggttttggca
ggagattacatgcaactaagccctgaggtctactcaccattttgtgaagaacggggatta
gggacctcacttttagaacggctctacgatctgtatccagtaaactccccttgcaaaatt
atgttggttgaaaattatcgctcccattctgccataaccaagtatacatcggatctgttt
tatgagggacgtttaattgcgagcggaaagcaagctgctcatccaaagttttacccactg
actttctttactgctagaggagaggactttcaagatccaaattcaactgccttccataac
aactcagaggtgtatgaggtatgcgagcaggttggagaaattgtcaaacactggccagtt
gaagaatggggtcctattgctgaaggatctattggcgttgtaacaccctatgctgatcag
atgattcggataagagcagagttgagaaagcgcaagcaccataagatcagtgtggaaaga
gtgttaaatgtacaagggaagcagtttagagttattattttgtcaactgtccgaacaaga
cacacttgcaaggcaggtgatgatgaattagattttggctttttatcaaatgctaagctg
ctcaccactgccattactagagcacaaagtttggttgctgttgttggagatcctgtatct
ctctgctccattggcaagtgcagaaaattgtgggagaaatttttgcagctctgctcagaa
gcaggatcactttatgggatcacatggtctgccctccgagctcaactggatggtgtcgaa
ctcaagaagacctacgttctaaatccgttggccccagagtttattcctcgttacctatat
ttttcacccttaccttcacttccaatggtaccaactatgccaccctatgttaactttttc
ccaccttacagttcttacatgcctgcgtaccccatgcattctgtcattggacatcatcca
gtgccatacatgccttcagcccatatacctccacagtggcctgctgtacgatatggcaag
ccactaatgaagcctccacctggcaggccagcccaacagttagttgcatcccatccatta
cgacccccggtaacctcaacaatggcacctccttacattgaagcaattggtcacgattat
cttcccgtgcagccaggtttttattctatgtactatccacattgccctcctatcacccac
cctataacagcaattagacctccaccaaatatagaatcatataatcgaagtgcatacatt
tcagccctccctcaaacgtatcatgatattaaacagttaaccccacctgcaaatttgttg
catcccattggcttcaaaagtgcacattttggacggagtatgccgctccctgtgccacaa
ccagatcatgttataccccaaagtgaaggggacaagtcataccagttccttaataatgta
cactttcctgaacgtaatctttcatccaacccatcggcagtttcccagtccacccgttca
cgtgctgacaccgaatctcctctgtcaactcattctagagaaagttcccattctagcaac
agtgatagcagaacatcccttagacctcaagttcagccaatatctcgaccacctcccgaa
acaaaactgcattctggttattctgcatcatttgtagcccatcaaaagcaacttgatgcc
caggatcagcatcctgttcagaagaggccaagctttccttcatatcggcagaatggggag
gttatgtcagatgaatcagctcttcctactccagatgtagttcgtatcatagatgacata
attagtgacagatcacctacaaaaactacaaatcattggcattggggggagtctgaagat
ggttccaagtcggaccctattcaagacatttgtcagtcaccaatggatttatggttagga
ggaaatcagcctaataggatgaggccttctcactcaaatgctcagcattcttcttcccca
tcttggttaggagcatcttctaatattggtaaaattgttacagtgcaagaagtggaagct
ggtctaaggaagaggcaaaaagctcatgaattgaatattggtagttcatcaagtctcaca
gcaccccaagcatctacagggctaccagcaactcacgcttcagctggacattcatatttc
catggggacagtgaaaattccagaagaggtagagaaggtgaggaaataaaagatgtgcga
agtggaagagtggatgttccaccaccacctggttttagtgggcttaatagattagttgac
ccactgacacagttagaactaagagatgttgaacctgttgggcacagaacccccagtatc
cctctgtacttgagacgtggaagtcgtgaaacatcttccatgcgtgggtgtaattctcct
ctgagtactcaagggtcaagtagtactaattctagtaatagttttgttattggatcttcc
gtgtggaacagcaactcaacagatttacattcctcttcatcacaaggagacgcaagtttc
aaagacatgtcatttctccattctggagggcattcagttgggggacaaagtcagttgact
cataattcaaataacaagacttatgcaggagtgttgaggtcctcattgcaacagtcgcct
atagaccaaaatgaggagtctaattatcttttaaaagacttaactgataagcgacattgt
atgtcaaaccatctctatcagtattttccatga
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