Macrobrachium rosenbergii (giant freshwater prawn): 136855474
Help
Entry
136855474 CDS
T10429
Name
(RefSeq) endoribonuclease Dicer-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Brite
Chromosome and associated proteins [BR:
mrj03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
136855474
microRNA pathway
RISC loading complex
136855474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136855474
NCBI-ProteinID:
XP_066988650
LinkDB
All DBs
Position
31:complement(28043065..28073039)
Genome browser
AA seq
1502 aa
AA seq
DB search
MDITDENEVDTDSADVQLPLNAQFTPRAYQIELFKCARKKNSILVLGTGSGKTFIAVLLI
KEFADEIRGSICNGSKRTVFVVNTVPLVHQQGLAIKTHTGLKVGQYEGSMGVDFWDDNKW
ADELEEHEVIIITAQIFLELILHARLPLRRVNLLIMDECHHAVGSHPMREIMRQYDALKR
AGVDECPRILGLTASVINKKCKKDDVSRNMHELELTMDCALVTSVDHEEVLRFTTRPDEK
LVIYRGFVMTPYQEMVAAQLDGVQCEVEEQEDLNDKVKKFIKKRILNIKHIMFSLGDWCV
ARAIYYEKESLEESAEAEEVPVVRELLGRLRTRFEEIYVQCVLREKLMGNPKDHVSHQVL
RLIEILAAIKSDEVAGLIFVERRNTAKILYDFLLELAKANEDLNFIKPLYVVGANTRPGI
DLKLAELELRKQRETLKKFREGQANFIVSTSVLEEGVDIRKCNAVIRFDKPANYRAYVQS
RGRARAVPSKYILMVEMGKYMLFINDLDVYREIEKTLLTLCHNRDLPTAEEIQRHFDEDD
LLPPYEPYGPQGPKVTANSAISLINHYIGKLPQDRFTTLAPDVIYVNRHGLSQAVILLPT
CSNLKEQIRGTFEDNKDLAKKSAALELCKVLHQMGELDHKLRPTVPSVEMLADDLLDLKL
ESSKAGEPNLGTKKHRQIYKREVHSSFRHTEGTPFYLYFVEIRPTDEDSREITVDSAESE
DTVGILCKEELVHCPFKLYGPKIGKVMVTLKQLDLNYNVSCEMMRKANHFHKLALESILP
INTSLMEFDPKGLDNGLFIVPLKGSSINFGLMDRMAQLSTVKEEIPIRSGQTYEFDRDLF
ENAVVFPLYGEMHQMHYVTEIKDNLNPRSEFPESKMLYENYEGYFSTKYGATITNRLQPL
ISVKHLPKELNYLKEVPVKKKGNRDPPYFIPELCGILPFRASLWWQLSCVPSILYRLNSF
GVAHKLSLDIGVSSKLNLAAITAQSLDSNWTELIAQNTPSDVNLAVALSQKKVNYVYPFM
LAHALTLMAANDVYNLERLEVLGDAFLKYVAGEYVYLKFPDDHEGKLSPKRTLLICNKTL
FQLAKKKGIPEKIQAIRLQPRVNGILPGFGVKKLVGRKLREIGYPNDKWHKLPVPEKISD
LEQVIKDLEDEEENLNGDVSNNPPTRASCFNPWEEHEVSDKSIADCTEALIGAYLLQCGA
DAAKDFLHWMGIGVHKGQKLLKDDLPIRTAIIQNESWSVKEITGFYKKACLDRLENTIQY
KFKDKSFIVQAVTHPSYTQNRITNDYQRLEFIGDAVLDYLVTGLIYSRHTTYTPGQMTDL
RSYYVNNETLARAAAKYELQKHLLHMSPKLQAAIDKFLQLCQEEDLERELITEDEEDDVE
EIEVPKSLGDLIESIIGAVYLDSNKNLEITWDVVSVLMGDVFQKKHKDIPKNRVRLLYET
SESVKFEKGERDGLAVYTVKVNDRFEVIGLGKNLKIAKDNAAKKALRMLQEMGSQGNHTF
PH
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atggatattactgacgaaaatgaggttgatactgacagtgctgatgtgcaacttccgctt
aatgcgcagttcactcctcgcgcctatcagattgagctcttcaagtgtgcgagaaaaaag
aattccattttagtgcttggtactggatctggaaaaaccttcattgcagtcttgcttatt
aaagagtttgcagatgagatacgtggttctatttgtaatggaagtaaacgtactgttttt
gtagtgaatacagtcccacttgtgcaccagcaaggtttagcaataaagacacatactggg
ctgaaagttgggcagtatgaaggctctatgggagtggacttctgggatgataataagtgg
gctgatgaacttgaggaacatgaagttatcatcattactgcacaaatatttttggagtta
attcttcatgcaagacttcccttgagaagagtaaacttactaattatggatgaatgccat
catgctgttggaagtcatccaatgcgtgaaattatgagacagtatgatgccctgaaaaga
gcaggtgttgatgaatgtcctagaattttgggcctcacagccagtgtcataaataagaag
tgcaagaaagatgatgtatcccggaacatgcatgaattagagctgacgatggattgcgca
cttgtcacttctgtggatcatgaagaggtgttgaggtttactactaggccagatgaaaaa
cttgtgatttacagaggatttgtaatgacaccttaccaagaaatggtagcagcacagtta
gatggagtgcagtgtgaagtcgaggaacaagaggatttgaatgataaagtgaaaaaattt
attaagaaaaggatattgaacatcaagcacataatgttttcgttgggtgactggtgtgta
gcacgtgctatatactatgaaaaggagagcttagaggagagtgccgaagctgaggaagtt
cctgtcgtacgagagcttttagggagactccggacaagatttgaagaaatatatgttcag
tgtgttttaagagaaaaactcatgggaaacccaaaggatcatgtcagccaccaagtttta
aggcttattgagatacttgctgccattaaaagtgatgaagtggcaggattgatttttgta
gagcgaagaaacactgccaagatcttgtatgactttcttctagagttggctaaggcaaat
gaggatttgaattttataaagcctctttatgtggttggtgctaacactcgtccaggaatt
gacttgaaattagctgagctggaactaagaaaacagagagagacattgaagaaattcagg
gaaggtcaagcaaattttatagtttcaacaagtgtgctggaggagggagttgacattcga
aaatgtaatgcagttatacggtttgataagcctgcaaattacagagcttatgttcagtct
agaggaagagctcgagcagtcccatccaagtacattttaatggtggagatgggaaaatat
atgttattcataaatgacttggatgtttatagagaaattgagaaaactctgttaacattg
tgtcataaccgagacttaccaacagcggaagaaattcagagacatttcgatgaagatgat
ttattgccaccatatgaaccgtatggcccacagggaccaaaagttactgcaaattcagcc
atttcacttattaatcattacattggaaaattaccccaagatagattcacaacattggcc
cctgacgtaatatatgtgaatcgtcatggcttgtcacaagcagttattcttttgcccaca
tgttcaaatctgaaggagcaaattagagggacctttgaagacaataaagatcttgccaaa
aagagtgctgcgctagagttatgcaaagttcttcatcaaatgggagaattagatcacaaa
cttcgaccaacagttccaagtgttgagatgctggcagatgatttgttagacttgaagcta
gaatccagtaaagccggggaaccaaatcttggaacaaagaaacacaggcagatatataag
agagaagtacacagttctttccgtcacactgaaggaacccccttttatttgtattttgtt
gagatacgccccacagatgaagattcaagagaaatcacagtagattcagctgaatcagag
gatactgtgggaatactgtgtaaggaggaacttgtccattgtccatttaaactttatgga
ccaaagattggtaaagtcatggtaacacttaagcagttggacctaaattataatgtgagc
tgtgaaatgatgaggaaggccaaccatttccacaagttggcattggaaagtatattgccc
atcaacacatctttgatggaatttgacccaaaagggttagataatggactgttcattgta
cctttaaaaggcagctctataaactttggacttatggaccgtatggctcagctttccacc
gttaaggaggaaattccaataagatcaggtcaaacatacgaatttgacagagatttgttt
gaaaatgctgttgtatttcctttgtatggggagatgcatcaaatgcattatgttacagaa
attaaggataatttgaatcctagatctgagtttccagaatctaaaatgttatatgagaac
tacgagggttacttcagtacaaaatatggtgcaacaattaccaacaggctgcagccttta
atctcagtcaagcatttaccaaaggagttgaattacctgaaggaggtgccagttaaaaag
aaaggtaacagagatccaccatatttcatcccagaactatgtggtattttaccctttcgt
gcttcactgtggtggcagctgtcttgtgtaccttctatactgtatcgactaaacagcttt
ggtgtggcacataaattaagtttagacattggcgtgtcatctaaactcaaccttgctgct
ataactgctcagtctttggattccaattggactgaacttattgctcagaatactccatct
gatgtcaatttagctgttgcactttcccaaaagaaagtaaactatgtatacccttttatg
cttgcccatgccttgacccttatggcagcaaatgatgtatataatttggagaggttagaa
gttttgggcgatgcatttctcaaatatgtagctggcgaatatgtttacctgaagttccca
gatgaccacgagggtaagctttcacctaagcgaacattactgatttgtaacaaaacactc
ttccagcttgctaagaagaagggaatccctgagaagatacaggcaataaggttgcaaccc
agagtaaatggtattcttcctggttttggagtgaagaaattggttggaagaaaattgcgt
gagattggataccctaatgataagtggcataaacttccagtcccagaaaaaatatcagat
ttggaacaagtgataaaagatctggaggatgaagaagaaaatcttaatggagatgtgagc
aacaatcctcccactcgagcatcctgtttcaacccatgggaagagcatgaagtatctgac
aaaagtattgcagattgcactgaagctctgattggtgcatatctcttgcagtgtggggca
gatgcagcaaaggactttttacattggatggggattggtgttcataagggacaaaaattg
ctgaaggatgatttgccaattaggactgcaataatacagaatgaatcatggtcagttaaa
gagatcactggtttttacaagaaagcatgtcttgacaggcttgaaaatactattcaatac
aaatttaaggataaaagctttattgttcaagctgtcactcatccatcatacactcagaac
aggattacgaatgactaccagagattagagttcattggagacgcagttttagattacctt
gtcactgggctaatttattcacgtcataccacatacacaccaggtcaaatgacagatttg
aggtcatactatgtgaacaatgagacacttgcaagggctgcagccaagtatgaattgcag
aaacatttactgcacatgtcacctaagcttcaagctgccattgataaatttctccagcta
tgtcaagaggaggatttggaaagagaattgataactgaagatgaagaggatgatgttgaa
gaaattgaagttccaaagagtcttggagacttaattgaatccattattggtgctgtgtac
ctagacagcaataaaaacctagagataacctgggatgttgtgtcggtactcatgggagat
gttttccaaaagaagcacaaagatatacccaagaaccgtgtaaggctgttgtatgaaact
tcagaatcggtgaaatttgaaaaaggggaacgtgatggtctagctgtgtatacagtaaaa
gtaaatgacaggtttgaagttattggccttggaaaaaatttaaagattgccaaagataat
gctgcaaagaaagctttaagaatgcttcaggaaatgggttctcagggaaatcatactttt
ccccattag
DBGET
integrated database retrieval system
