Macrobrachium rosenbergii (giant freshwater prawn): 136856120
Help
Entry
136856120 CDS
T10429
Symbol
HDAC6
Name
(RefSeq) uncharacterized protein HDAC6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mrj01009
]
136856120 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrj03019
]
136856120 (HDAC6)
04131 Membrane trafficking [BR:
mrj04131
]
136856120 (HDAC6)
03036 Chromosome and associated proteins [BR:
mrj03036
]
136856120 (HDAC6)
Enzymes [BR:
mrj01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
136856120 (HDAC6)
Protein phosphatases and associated proteins [BR:
mrj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
136856120 (HDAC6)
Messenger RNA biogenesis [BR:
mrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
136856120 (HDAC6)
Membrane trafficking [BR:
mrj04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
136856120 (HDAC6)
Chromosome and associated proteins [BR:
mrj03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
136856120 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
136856120
NCBI-ProteinID:
XP_066989870
LinkDB
All DBs
Position
34:complement(6509173..6546991)
Genome browser
AA seq
2004 aa
AA seq
DB search
MKDEKPIPQRKNSGRKLSSDRGSGGTGGSAPGTTDSKGETTAARRKRRLAGIRPRISIEE
LRNAFKRQASVPQDDTECVFDPMAKAQESKTVIRGRTGVVYDEAMAKHKCLWDDTYPECP
ERLLHCLDRCKELQLLSRCETLESRKATEEEVAKLHSRSVIDLLCYTQKEEDEEAFEALS
SHYDTVYFNPHTYEAAMLAAGNTLVLVDSIASGKVQNGMALVRPPGHHAMKAEYCGYCFF
NNVALAAQRALEKHNMSRVLIVDWDVHHGQATQQMFYDDPRVLYFSIHRYEHGSFWPELR
ESEYTYVGSGPGRGFNFNLPLNKTGMKNEDYLAVFHQVLLPVAYEFNPELIFISCGFDAA
VGCPEGEMEVTPAFYAHLTSSLMALAQGKVAVVLEGGYCLESTAEGASKTLSALLYDPCP
MLMDSLGRPSQSIQESILNLIYAQRPYWKCFQYQGSFSVSEEVAVPKHVPSVTYLGKETV
SVTYPTRSAYPYHSSIKLEEIALRLKALKEKENIPHLPGQKLCLVYDEEMSKHKNTSEKE
HPERPERTERIWRFLSEFGVTERSLILESRRATREEIEAVHTKDHVDLMFSLNTLSNENI
RNLQETYKSVYLHPSSNDAALLSSGSLLQVVDSVCSGESQSGIGVIRPPGHHAEMDHPHG
FCLYNNVAVATKYAAQKYGYQRIMVLDWDVHHGNGIQHAFETDPSVLYVSIHRYDDGLFF
PSSEDANYDRVGVGKGEGFNVNIPWNKSGMGDAEYMSAMLQVVMPIAYQFDPQLIIVSAG
FDAARGDPLGGCRVTPECYGHMTHLLTSLAGGRIVLALEGGYNLNVISYCMTMCAKALLG
DPMPALDKALVPNKRAVETISSVIQVHSKYWSSLCFQVALPVEDVLSQGFGGMPQAVESG
MSGSEVSSCNPSPVSTPSVSPIYVSAPSSPDKIWKEKQLVNSFKERSSMSCEAEFCSDRI
TSPTEEPQEPLQSSGCSDSLGSSLSVYTTPVPTPEKISPVKTKTLSPKDCDTSGKLQTPV
MKGKTKKGNSSTPNRLQKPRKKQSDVLMVAASSIAREKKYTSVVFSESCGEGCKSETLEN
IRTHLQELKLLETCKIMPSKEARKEEFSFLFNDGIGGEHVSEEEKDLLLTAVGNAVDLMS
EIVFCRCQNGIVLVPCGNAGTGNFSLCDIASFSAKHTIDTLNVQRVMIVDLDCSTNRDCH
AFCGDRRILTFCLRLHGNRQCQSSGKESTKGCESCDRNIKVNLGCKNFHMENYYTLFHQL
ILPVAYEFAPEVIVFASNYEAAAHCANVFPVVYAHLVGQLMALASGRILVLSGTGQREAV
TKECISAVFSALQDIPCSSTPKVMESASPFAKAEVLEVLNAKRNDWKTLQSHAQTSCALS
YSRKPDDSTQECCGQDPVSDFKRYAKSYADEAARPLCLVYDESMLEHFSYDDRTHPECPD
RIRCIYQRLEEFRIVERCLRVKARPALVRELEELHSPKHLRLMSSLVSKKPSDLQVLQEN
YESVFFHRQSHNAALMAAGSVNAVVDSVLKGESHRAVAVIRPPGHHAERNEPCGFCFFNN
VAVGAKHAINEYGLKRILILDWDVHHGNGIQHMFESEPRVLYVSIHRYDNGRFFPCSAEA
NYNRVGIKKGKGFNINIPWNKGSMSDGDYIAAMTQIVLPVAFEFNPQLVLVSAGFDAAVG
DPLGGCQVTPECYGHMTKLLMQLAEGRVVIALEGGYNLNTISYCMTMCAKALLGDPIPSL
PEGLAPSESAVESLSNVISAHKKFWPSLDLKNTLGLSPGNSYSPSSPASEGGRRISKGDK
ATNNAVTSPVDELSANLCGVTLEDKVDTDQKSPLDSEHNIEMKGEPSSSRASEENGGENM
ENELEGAVGGTSDHRGDGVNTFLLTEVPGAEQMYAVVPKTWCPHLEQIKDVPSAGLKTDA
PCEECHDHSENWVCLTCYKVLCGRFVNEHMLMHGVSEEHFMVLSFADLSVWCYGCDSYIH
HDSLREAKRAAHVDKFGEDIPGST
NT seq
6015 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacgaaaagcctatacctcagaggaaaaactcagggcggaagttgtcgtctgac
agagggagcggaggcactggagggtcggcacctggaacgactgatagcaaaggagaaact
accgcagccaggcggaaacgaagattggctgggatccgtccaaggatatccatcgaagag
ctaaggaacgccttcaaacgtcaggcttccgttccccaagatgacaccgagtgtgtgttt
gatcccatggcgaaggcccaagagagtaaaaccgtcatccgtggtagaacaggtgttgtt
tacgacgaagctatggccaaacacaagtgtctctgggacgacacgtacccagagtgtccc
gagagactcctacattgtctggataggtgcaaggaacttcagttactcagtcgctgtgag
acgttagagtcgagaaaagccacagaggaggaagttgccaagcttcactcgcggtcagtg
attgatcttctgtgctacactcagaaagaagaagatgaagaagcctttgaagctttgtca
tcccattatgacactgtatacttcaaccctcatacgtacgaagcagcgatgcttgctgct
ggaaatacgctggtcttggtagacagcatcgcttcaggaaaagtgcagaatgggatggct
ttggtcagacctcccggacatcacgccatgaaggctgagtactgcggctactgtttcttc
aacaacgtcgctttggctgcccagcgagcgctggagaagcataacatgtcccgagttctc
attgtggattgggatgtgcaccacggacaagctactcagcaaatgttctatgatgatccg
agagttctctatttttccatccaccgctacgaacacgggagcttctggccagagctgagg
gagagtgaatacacctacgtaggcagcggaccagggagaggttttaactttaacctcccc
ctcaacaagacggggatgaagaacgaagattatctggcagtgtttcaccaggttttactt
cctgtggcctatgagtttaacccagagctgatatttatatcatgtggatttgatgctgct
gttgggtgcccagagggagagatggaggtcactccagcgttttatgctcacctgacatct
agtcttatggctttagctcagggtaaagtggctgtggtccttgagggcggctactgccta
gaatcaactgcggaaggggcttccaaaacgctcagtgccctgttgtatgacccttgccct
atgctcatggattcccttgggaggccaagtcagagcatacaggaatccatactcaacttg
atttacgcacaacgaccctattggaaatgcttccagtaccagggttctttttcggtgagc
gaggaggtcgccgttccgaagcacgtgccatctgtcacctaccttggaaaggaaaccgtt
tcagtcacgtatccaacgagaagtgcttatccttaccattcctctatcaagctcgaggag
attgcgttgcggctgaaggcgcttaaagaaaaggagaatattccacacttgccaggccag
aaactttgcctcgtctacgatgaagaaatgagcaagcacaagaatacatcggagaaggag
catccggagagaccagagagaacggaaagaatctggaggttcctgagtgaatttggcgtg
actgagagatcgcttattttggagtctcgaagagccaccagggaagagatagaagctgtg
cacaccaaagatcacgtagacctcatgttcagtctgaacactctttcgaacgagaacatt
aggaacttgcaagagacgtacaagtcggtatatcttcatccttcaagtaatgatgcagcc
ttgttatcttcaggcagtttactgcaggttgtggatagtgtttgtagtggagaaagccag
tcaggcattggggttattcgcccccctggtcaccatgctgagatggaccacccccatgga
ttctgcctctataacaacgttgccgttgcaactaaatatgctgctcaaaagtatggatat
caaagaatcatggttcttgattgggacgttcatcacggcaatggaattcagcatgccttt
gaaacggacccttctgtgctgtacgtgtccatacaccgctacgatgacggcctcttcttc
ccgtcttcggaggacgcaaattacgaccgagtgggtgtagggaaaggggaaggcttcaac
gtcaatattccctggaataagagtggcatgggagatgctgaatacatgtctgcgatgctt
caggttgtgatgcccatcgcgtaccagtttgacccgcagctcattatagtgtcggcagga
tttgatgccgcaagaggggatccccttggaggttgtcgggttacgcccgagtgctatggc
cacatgacgcatctgctgacctctctagctggcggccgcatcgtcctggccttggaaggt
ggttacaatctaaacgtcatcagttactgtatgaccatgtgcgcgaaagctcttctcgga
gacccgatgccggctttggacaaagctcttgtgccaaataagagggcggtggagaccatc
agcagcgtcatccaggtgcactcgaagtattggtcttccttgtgttttcaggttgccttg
ccagtagaagacgtattatctcagggatttggtgggatgccccaagctgtcgaatctgga
atgtcgggctcagaggtctcctcgtgcaatccgtcgcccgtatccacaccgtcagtctct
ccaatatatgtatctgctccttcctccccggataaaatttggaaagaaaaacagttggtc
aacagctttaaagaaagatcatctatgtcttgtgaagcagaattttgctcagatcgcata
acctcacccaccgaagaacctcaggaaccgttgcaaagcagtgggtgttcggacagtcta
ggcagctctctgtctgtttacaccacgccagttcccacaccagagaagatttcaccagtg
aaaacaaagaccttgtcacctaaggactgtgatacgtctggtaagctgcagactcctgtc
atgaaaggcaaaactaaaaaggggaattcttctacgccaaaccgccttcagaagccgaga
aaaaagcagagtgatgtgttaatggttgcagcttcaagcattgcccgtgagaagaagtac
acttctgttgtgtttagtgaaagttgtggagaaggttgtaaaagtgagacactcgaaaat
atcaggactcatttacaggaattgaagcttcttgaaacttgcaaaattatgccttctaag
gaagcgaggaaagaggaattttctttccttttcaatgatggcattggtggagaacacgtg
tctgaagaagaaaaggaccttttattgacagctgttggaaatgctgtcgatttgatgtct
gagatagtcttttgtaggtgccagaacggcattgtccttgtgccatgtgggaatgctggt
acgggaaactttagtttatgtgatattgcttcttttagtgcaaaacataccattgatacc
ttgaatgtccagcgtgtgatgatcgtagacttagactgtagtacaaatcgagattgccat
gctttttgtggtgacaggagaatcctgactttttgccttaggttacacggtaatcgacag
tgtcagagtagcggaaaggagagtacaaagggctgtgaatcttgtgatcgtaacattaaa
gtcaacttgggctgcaagaatttccacatggaaaattattatactctattccatcagctc
attttgccagttgcttatgaattcgctcctgaagtcatcgtcttcgccagtaactacgaa
gcggcagctcattgcgcaaatgtctttccagtagtttatgctcatttggtagggcagctg
atggctttagcaagtggtcggattttagtgttaagtgggactgggcagcgtgaagcagta
accaaggaatgcatttctgctgtcttttccgctctccaagacatcccttgtagctccacc
ccaaaggtaatggaaagtgcgtcgccgtttgccaaagcagaagttctggaggtcttgaat
gccaaaaggaatgactggaagacattgcagtcccatgcccagacttcatgtgccttgtct
tacagtcggaaaccagatgattctactcaagagtgttgtggacaggaccctgtcagtgac
ttcaagagatatgctaagagttatgcggatgaggctgcgcgtcctttgtgccttgtgtat
gacgagtccatgttggaacacttcagttacgacgacaggacgcatccggaatgtccagac
cggatcaggtgcatatatcagcgcttggaggagttcaggattgttgaacgctgcctgcgt
gtcaaggcaaggccagcattagtgagagaactggaggaattgcatagcccaaagcacctg
cgtctgatgtccagtttagtgtcgaagaagccaagcgatcttcaagttttgcaggaaaat
tacgagtcggttttctttcatcgacagtcacacaatgctgctttgatggcagctggttct
gttaatgctgttgtggacagcgtcctgaagggcgagagtcatcgtgcagtggctgtgata
cgacctcctggtcaccatgctgagaggaatgaaccgtgtggcttctgtttcttcaataat
gttgctgttggtgcaaaacatgccatcaatgaatatggtttgaaaaggatattaattcta
gactgggatgtgcatcacggcaatggcatccaacacatgttcgagtcggaacctcgtgtg
ctctacgtttcgattcaccgctacgacaacggcagatttttcccgtgcagcgcggaggcc
aattataaccgtgttggcatcaagaaaggcaagggcttcaacatcaacataccgtggaac
aaggggagcatgagtgacggcgattacatagcagctatgactcaaattgtgttaccagtg
gccttcgagtttaaccctcagttggttctagtgtcggcaggatttgacgcagctgttggt
gaccctctaggaggttgccaagtaacacccgagtgttatggacacatgacgaagcttctc
atgcaattagccgagggcagagttgtcattgctttggagggaggttacaaccttaacaca
atcagctactgcatgactatgtgtgccaaagctttgctcggcgaccccattccatctctt
cccgagggactcgccccttccgagagtgccgtggagtctctgagtaacgtcatctccgct
cacaagaagttttggccgtctttagacctgaagaacactttgggtctgtccccgggaaat
tcgtacagtccctcttcacctgcttcggaaggcggtcgcaggatatctaaaggagacaag
gcgactaacaatgctgtaacatcaccagttgatgaattgtctgccaatctttgcggagtt
acactagaagacaaagttgatacagaccagaaatcccctttggactctgaacataacatc
gaaatgaagggggaaccttcatcttcacgtgcctccgaggagaatggcggcgagaacatg
gaaaatgaactagaaggtgcggtagggggcacatcagatcaccggggagatggtgtcaat
actttcttactcaccgaggttcctggagcagagcaaatgtatgctgttgtaccaaaaaca
tggtgccctcacctcgagcaaatcaaagacgtgccgagcgccggtttaaagacagacgct
ccctgcgaggaatgccatgaccactcagagaactgggtgtgcttaacctgttataaggtc
ctctgcgggcggttcgtcaacgagcacatgctgatgcacggagtctcggaagaacacttc
atggttctaagtttcgcagatctttccgtttggtgttatggctgtgattcttacattcac
catgattcgttacgagaagctaaacgggcagcccacgttgacaagttcggagaagatatt
cctggatctacttga
DBGET
integrated database retrieval system
