Macrobrachium rosenbergii (giant freshwater prawn): 136856364
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Entry
136856364 CDS
T10429
Symbol
pic
Name
(RefSeq) LOW QUALITY PROTEIN: DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03420
Nucleotide excision repair
mrj04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
136856364 (pic)
09124 Replication and repair
03420 Nucleotide excision repair
136856364 (pic)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mrj04121
]
136856364 (pic)
03400 DNA repair and recombination proteins [BR:
mrj03400
]
136856364 (pic)
Ubiquitin system [BR:
mrj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
136856364 (pic)
DNA repair and recombination proteins [BR:
mrj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
136856364 (pic)
TCR (transcription coupled repair) factors
Cul4-CSA complex
136856364 (pic)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
Lgl_C
Motif
Other DBs
NCBI-GeneID:
136856364
NCBI-ProteinID:
XP_066990251
LinkDB
All DBs
Position
35:3406203..3425000
Genome browser
AA seq
1137 aa
AA seq
DB search
MAAAAYNYVVTAHKPTAVTACATGHLTSPTDLNLVVARNNRVELHLVTPEGLRPLKELTI
YGKISCMHLFTPQDESKDLLFILTMRYCAMILECEGDGEHFEILTRAHGNVADKIGKACE
TGMIAIVDPQARCIVLRLYEGLIKVIPLDKDNSELKAYNIRVDELQIQDIAFLYGCSNPT
IIIIYQDTHGRHIKTHEISLKEKEFSKMPWKQDNVETEASIIITVPEPYGGAIIIGQETI
TYLTGTSHVTVAPPLIKTSTIVCYAKVDSNGSRYLMGDMSGRLFMLLLDKQDDRVEATVK
VELLGEISIPECLTYLDNGVVFVGSRLGDSQLIKLNTEPDSSGQYVSVMQTFNNLGPIID
MVVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEQASIELEGIKGMWSLSVNSPKHH
NTIVLSFVGLTRVLTLSGEEVEETEIAGFVSDQQTFLSSNVIYEQLLQVTGSSCRLVSES
SGQLVCEWRPPEGRNISVVAANTNQVVAAAGQHIYYLTIQPNTLQLEASTTVEHEVACLD
VSPLWEEEMASVVAVGLWTDISARVLTLPTLEENAKEFLGGDIIPRSIIMTTFEGNHYLL
CAMGDGQLFYFTYSPSTGYLSDKKKVVLGTQPTTLRRFRSLSSTNVFACSDRPTVIYSSN
HKLVFSKVNLREVTHMCPLNAEAYPSSLALATSEGITIGTIDEIQKLHIRTVPLGETARR
IAYQEETETFGVITMRVDVMDSNGIRSGGMCASLGAHSSSSASNTSSLLKPPVQPPPEPG
QEVETHNLLIISQNTFEVLHCHSFHAGEYALSICSTKLKDDPTIYYVVGTALVNPEESES
KLGRIILFSFTDGKLQQVAEKEIKGACYSLCEFQGKLLAAISSTVRLFEWTNERELRLEC
SHFNNVAALYLKTKXDFILVGDLMRSMTLLQYKTLEGSFEEIARDYDPNWMTAIEILDDE
LFLGAEHSYNLFVCHKDSAATSDEERQQMQEVGRFHLGDFVNVFRHGTLVMQGVPEATTV
TQGCVLYGTVHGSIGLVTSLNLDLYNQLLEMQKRLAKVIKSVGKIDHDFYRSFSTDRKTD
RCEGFIDGDLIESFLDLTPDKMKEVAHGLLINDGSGMKTEATPDDLIKTVEELTRIH
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagccgcttacaactatgttgttacagctcacaaaccgacggccgtcacagct
tgtgctacagggcacctgacatcgccaacagacctgaacctggtggtggcgaggaacaac
cgcgtagagctccacttggtgaccccagagggcttgcgtccgctgaaggagctgactatt
tacgggaagatatcatgtatgcatttattcacgccgcaggacgagtcgaaagacttgctc
ttcatcctgaccatgcgttactgcgcaatgattttggagtgcgagggagatggggagcat
tttgaaatcctaaccagagcacatggaaatgtcgcggataaaattggaaaggcgtgcgag
accggaatgatagccattgtagacccacaggcccggtgtattgtcctccgcttgtacgaa
ggccttatcaaagtgattcccctcgataaggataacagcgaattgaaggcctataatatt
agagtggatgagctgcagattcaagatatagcattcttgtatggctgctcaaaccccacc
atcatcatcatataccaagacactcacggacgtcacatcaaaacccacgaaatctctctc
aaggagaaggagttttccaagatgccgtggaaacaagacaacgtcgagaccgaggcgtcg
atcatcatcacagttcctgagccgtacggaggtgccatcatcatcggacaggagacaatc
acgtacctgactggcacctcgcatgtcacagtggctcccccgctcataaagacgagcacc
atagtctgctacgcaaaggtggattccaacggctcaaggtacctcatgggagacatgtct
ggccgcctgtttatgttgcttttggacaaacaggatgatcgagtcgaagcgacggtcaag
gtggagcttttaggtgaaatctcgatcccagagtgtctcacgtacttggacaatggtgtc
gtcttcgtgggctccaggctgggagactcgcagctcataaaactcaacacagagcccgat
tcctccggccagtacgtttctgtcatgcagaccttcaataacttgggtcccatcattgac
atggttgttgtcgatttggaacggcagggacagggccaacttgtaacctgttcgggggcc
ttcaaggaaggatctctccgaatcatccgaaacgggatcggcattcacgagcaagcttcc
atcgagctggagggcattaaaggaatgtggtctctgagcgtgaactcgccaaagcatcac
aacacgatcgttctctcgtttgttggtcttacgagggtgctcacactaagcggagaggaa
gtagaagagacggagattgccggattcgtctccgatcagcagactttcctgtcttcaaat
gtcatttacgaacagcttcttcaggtcactggcagttcctgccgtttagtcagcgaaagc
agcggccagttggtttgcgagtggcggccaccggaaggacggaacatctccgtagttgca
gcgaacaccaaccaagtggtggcggcggctggccaacacatctactacctcaccatccag
cctaacacactgcaacttgaggcctcgacaacagtggagcacgaagtggcctgccttgat
gtctcgcctttgtgggaggaggagatggcttccgttgtggctgttggtctctggactgac
atttctgctcgggtcctgaccttgcccaccctcgaagaaaatgccaaagaattccttggt
ggagatataattcctcggtcgataatcatgacaacgtttgagggtaaccattatctcctg
tgtgccatgggagatggacaacttttctacttcacgtactctccttcgactggttacctc
tctgacaagaagaaggttgttttgggcacccaacccacaacgctccgcagatttcgttct
ttgtcgtcgaccaacgtctttgcctgctcggacagaccaacggtcatttactcgtccaat
cacaaattggtgttttccaaagtcaacttgagagaagttacgcacatgtgtcctctcaac
gcagaggcttatccaagcagtttggctcttgccacgagcgaaggcatcaccattggaacc
atcgacgagattcagaaactgcacatccgcaccgtacctttaggagaaaccgcacgtcgt
atagcatatcaggaagaaacggagacgttcggtgtcatcacaatgcgcgtggacgtcatg
gacagcaacggcataagaagcggaggcatgtgtgcctccctgggagcccactcatcgtcg
tccgcctcgaacacatccagtttgctcaagccccctgttcagccaccaccagaacctggc
caagaggttgaaactcacaatctgcttatcatatcacaaaatacatttgaagtcctgcac
tgtcacagtttccacgccggggaatatgccctgagcatctgttccacgaaactgaaggat
gaccccacaatatactacgtagttggcactgcattagtcaatcctgaggagtctgaatca
aaactgggtcgaattattctcttctccttcacggacgggaaacttcagcaggtggctgag
aaggagataaaaggagcgtgctattccctctgtgaattccaaggaaaattgttggctgca
atttccagcacagtgagattgttcgagtggacgaatgaaagagagctgcggctagagtgc
tcccatttcaacaacgtcgctgccctctacctgaagacgaaangggacttcattctcgta
ggggacttgatgagatccatgaccttgctgcagtacaagacgttggaaggcagttttgaa
gagattgccagagattacgatcccaattggatgacagcaattgaaatcctagatgatgaa
ctattccttggtgctgaacactcatataacctcttcgtatgtcacaaagatagcgcggca
acgtcggacgaggaacgccaacagatgcaggaggtgggacgcttccatttgggagatttc
gtcaatgtcttccgtcacggaactttggtcatgcaaggtgtacctgaagccaccacggtt
acccagggttgtgtgctgtacgggacagtccacggctctatcgggttggtgacgagccta
aatttggacctttacaaccagctgctcgagatgcagaaacgtctggctaaggtcatcaaa
tccgttgggaaaattgatcacgatttttacaggagttttagcacggatcgcaagacagac
aggtgcgagggattcatagacggtgatttgatcgagagcttcttagaccttacgccggac
aagatgaaggaagttgcgcatgggttgctgatcaacgacggatctggcatgaagacggaa
gccacacccgacgacctcatcaagacggtcgaagagctgaccagaatccactga
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integrated database retrieval system
