Candidatus Methylopumilus rimovensis: FIT61_00270
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Entry
FIT61_00270 CDS
T10495
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mrk Candidatus Methylopumilus rimovensis
Brite
KEGG Orthology (KO) [BR:
mrk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mrk03016
]
FIT61_00270 (truB)
Enzymes [BR:
mrk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FIT61_00270 (truB)
Transfer RNA biogenesis [BR:
mrk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FIT61_00270 (truB)
Prokaryotic type
FIT61_00270 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
QDD12937
UniProt:
A0AAE6FS10
LinkDB
All DBs
Position
50000..50902
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AA seq
300 aa
AA seq
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MQKKSSKREIDGVFLLDKPLGFSSNQALKKIQWLLNAKKAGHTGTLDPMASGLLPICLGE
ATKFSHRLLDANKTYIATIQLGITTTTGDQEGAVVSDKEVVLNEAQLNDTLKKFIGEITQ
IPPMYSALKFEGKPLYEYARDGIEIERKSRQIKIYDIKLIKIEESIITIEVACSKGTYIR
TLAEDIGQTLGCGAHLKGLVRTQTGNFQLSDALSVEALEAMSMASREKSLIPIDALLEDL
LSVELTVAETEAIKKGQSIDFIGKNEKELRLYSATGQFVGVGQPDLEGRLFPKRLIANIL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagaagtcttcgaagcgcgagattgatggcgtttttctactcgataagccgctt
ggtttttcttcaaatcaagcgttaaaaaaaattcaatggttgttaaatgcaaaaaaagca
ggacacacaggcacccttgatccgatggcttcaggacttttgcctatttgtttaggtgag
gctacaaaattttctcatcgtcttcttgatgccaataaaacttatatcgcaacgattcaa
ttgggcatcactactacaacgggagaccaagaaggggctgtagtttcagacaaagaagtt
gtcttaaatgaagctcaattaaatgatacattaaaaaaatttataggtgagattacacaa
ataccgcctatgtattctgcgctgaaatttgaaggaaaacccttgtatgaatatgcaaga
gatgggattgaaattgagcggaaatctcgacaaatcaaaatttacgacatcaagcttata
aaaattgaagagagcatcatcactattgaagttgcatgcagtaaaggcacttacattaga
accttggcagaagatattgggcagacattgggatgtggtgcccatttaaagggtttagta
aggacccaaacaggtaattttcaattatcagatgcactctcagtcgaagcacttgaggct
atgtctatggcgtcacgagaaaaatcactcatacccattgatgctttactcgaagattta
ttatcggtcgaattaactgtggccgaaacggaagcgattaaaaaagggcaaagtattgat
tttattggtaaaaatgagaaagaattacgcttatatagtgctacaggtcaatttgtaggc
gtaggccagcccgaccttgaggggcgcctttttcctaagcgcttaatcgcaaatatatta
taa
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