Candidatus Methylopumilus rimovensis: FIT61_00420
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Entry
FIT61_00420 CDS
T10495
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K02005
HlyD family secretion protein
Organism
mrk Candidatus Methylopumilus rimovensis
Brite
KEGG Orthology (KO) [BR:
mrk00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
FIT61_00420
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Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND_2
Beta-barrel_YknX
BSH_RND
HH_MFP_RND
BSH_CzcB
Beta-barrel_RND
HH_CzcB
HH_EMRA
HH_YBHG
LcnD_C
Biotin_lipoyl
Beta-barrel_AprE
YknX_C
R_equi_Vir
BSH_YknX
BSH_CusB
HH_AprE
HH_CyaD
SPESP1
HH_AAEA_pHBA
Motif
Other DBs
NCBI-ProteinID:
QDD12962
UniProt:
A0AAE6KNV6
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Position
80897..82093
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AA seq
398 aa
AA seq
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MKRIVHHLINIALILAFIFGAMYVYKLSNKKKPEDLYRLERLTLGDIEQNVTANGTINPV
AMVNVGTQVSGLVKNIYADFNDQVKQGQILLELEDNLFKAQIEQSRGNVKNCEASVELAK
ANEARMRSLFEKEYVSKQDLDQAVQALKSSEALLMSAKAKLSLDQTNYGYSIIKSPVSGI
VIDRVVDVGQTVAASLQTPILFKIAKDLSKMEIDTSFAEADIAKIQVGQSVKFSVDAYPN
RTFEGTVKQIRLNPVNTANVVTYNIVILVENQEGLLLPGMTAYVTINFAHHEKVLLVPNA
ALRYQPKNENFNLTAKKSEAFRNGDRTKREGYGVGKIYTLRDNKPLMIKVNTGITNGKLT
EVMSSEIKENDLIITGDLVSDQKQRSGAQGPSRPPRVF
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaattgttcatcatttgattaatattgccttaattctcgcatttatctttgga
gcgatgtatgtttataagttgtctaataaaaagaaacccgaagatttatatcgactagaa
agattgacattaggggatatcgaacaaaatgtgacagccaatggcacgatcaatcctgtg
gctatggtaaacgttggcacacaagtctcaggacttgtaaaaaacatatatgcagatttt
aacgatcaggtaaaacaaggtcagatacttttagagctagaagataatttatttaaagcc
caaattgagcagtcaagaggcaatgtaaaaaattgcgaagcatccgtcgagcttgcgaag
gcaaatgaggcaagaatgcgctcattatttgaaaaagaatatgtgtctaaacaagatctt
gatcaagcagtgcaagccttaaaatcatcggaggcacttttaatgtccgccaaggcaaaa
ttaagtcttgatcaaacaaattatggatattccatcattaaatcgcccgtgtcaggcatc
gttattgatcgtgtggtagatgttggtcaaactgtcgctgcaagtcttcaaacacctatt
ttatttaaaattgcgaaggatctatctaaaatggaaattgatacgagcttcgcagaagct
gatattgcaaaaattcaagtcgggcaatcggttaaattttctgtagatgcataccctaat
cgcacttttgagggaacggtaaaacaaatccgtctaaatcctgtcaatacagcaaatgtt
gtcacttataacattgtaattttagtggaaaatcaagaggggttattacttccaggtatg
actgcttatgtgaccattaattttgcgcatcatgaaaaagtccttttagtgcccaatgct
gcgctgaggtaccaaccaaaaaatgaaaattttaatcttacagccaaaaaaagtgaggct
tttcgaaatggagatagaacaaagagggaaggttatggtgtaggaaaaatttatacgctt
cgagacaataaacccttaatgattaaagtcaatacaggtattaccaatggaaaattgact
gaagttatgagttcagagattaaggagaatgatcttataattaccggagatcttgtgagt
gatcagaaacaacgttcaggagctcaagggccaagtcgaccacctcgcgtattttaa
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