Candidatus Methylopumilus rimovensis: FIT61_00830
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Entry
FIT61_00830 CDS
T10495
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
mrk Candidatus Methylopumilus rimovensis
Pathway
mrk00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mrk00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FIT61_00830 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mrk01007
]
FIT61_00830 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mrk03016
]
FIT61_00830 (aspS)
03029 Mitochondrial biogenesis [BR:
mrk03029
]
FIT61_00830 (aspS)
Enzymes [BR:
mrk01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
FIT61_00830 (aspS)
Amino acid related enzymes [BR:
mrk01007
]
Aminoacyl-tRNA synthetase
Class II (A)
FIT61_00830 (aspS)
Transfer RNA biogenesis [BR:
mrk03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
FIT61_00830 (aspS)
Prokaryotic type
Other AARSs
FIT61_00830 (aspS)
Mitochondrial biogenesis [BR:
mrk03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
FIT61_00830 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
QDD13039
UniProt:
A0AAE6FRV8
LinkDB
All DBs
Position
complement(158567..160354)
Genome browser
AA seq
595 aa
AA seq
DB search
MMRTHYCGDLNKKHIGETVTLCGWAHRRRDHGGVIFIDLRDREGIAQIVIDPDTKETFAI
AESIRNEFVLKVVCKVRARPEGTVNLNIPTGEVEMLASTIEILNPSLTPPFMLDDDSISE
MIRLEYRFMDLRRPMMQNNLRLRYRVAKVLRDFLDENGFMEIETPMLTRSTPEGARDYLV
PSRVHAGEFFALPQSPQLFKQLLMVSGFDRYFQITKCFRDEDLRADRQPEFTQVDIETSF
MNEEDIMTIVEKMIREMYKKVASIDLPSQFQRMTYLEAMHKYGSDKPDMRVTLEITELTD
IMKDVDFKVFSSAANMKGGRVAALRVPNGSLITRSEIDAYTEFVKIYGAKGLAYIKINDI
HELNETGLQSPIVKNIHVNALKAIIEKTGATNGDIIFFGADKEKIVNEALGALRLKIGHE
KNHVDGRAWAPLWVVDFPMFEHDEETDRWVAIHHPFTAPKEGHEDLLANEPGKCLSKAYD
MVINGWEVGGGSIRIHEEKVQSKVFDALKISKEEAKEKFGFLLDALQYGAPPHGGLAFGL
DRLVTLLAGAESIRDVIAFPKTQRAQCLLTKAPNVVDEKQLRELHIRLRTPQPTT
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgaacgcattactgcggtgatttaaataaaaaacatataggggagaccgtcact
ttgtgcggctgggctcaccgtcgtcgtgatcatggtggtgtgatctttattgatcttcgc
gatcgagaaggtattgctcaaattgtgattgatcctgacactaaagaaacatttgcaatc
gctgaatcaattcgtaatgaattcgttctaaaggtggtatgtaaagtaagagctcgccca
gagggaacagtgaatttaaacatccctacaggtgaagttgagatgttagcttcgactatt
gagattttaaacccatcactcactccaccattcatgcttgatgatgactctatttcagaa
atgattcgtcttgaatatcgctttatggatcttcgtcgtccgatgatgcaaaataattta
cgtcttcgctatcgcgtcgcaaaagttttacgcgactttttagatgaaaacgggttcatg
gaaattgaaacaccgatgttgacacgaagcacccctgaaggtgctcgcgattatttagtg
ccatcacgtgtccatgcaggtgaatttttcgcactccctcagtcccctcaattatttaaa
caattgttgatggtgtcaggctttgatcgctacttccaaatcacaaaatgttttcgcgat
gaagatctaagagcggatcgacaacctgaatttacacaagtcgatattgaaacttcattt
atgaatgaagaagacatcatgacgattgttgaaaaaatgattcgtgagatgtataagaaa
gtggcatcgattgatttgccatcacaatttcaacgcatgacttaccttgaagcaatgcat
aaatatggctcagataaaccagatatgcgtgtgactttagaaataactgaattgaccgat
atcatgaaagatgtcgactttaaagttttttcaagtgcagccaatatgaagggtgggcgt
gtcgcggcattaagagtgccgaatggatctctaattacacgttctgaaattgatgcttat
accgagtttgtcaaaatttatggcgctaaaggtttagcttatatcaagattaatgacatc
catgaattaaatgagacgggtctccaaagtcccattgttaagaatatccacgtgaatgct
ttgaaagcaatcattgaaaaaaccggcgctactaatggcgacattattttctttggtgcg
gataaagaaaaaattgtgaatgaagccttgggtgctttgcgtcttaaaatcggtcatgaa
aaaaatcatgtcgatggaagagcatgggcgcctttatgggtcgttgattttccgatgttt
gaacatgatgaagaaacggaccgttgggtggctatccatcatcctttcacagcgcctaaa
gaaggtcatgaagacttacttgcgaatgaaccaggtaagtgtttatctaaagcctacgac
atggtgataaacggttgggaagtcggtggtggctccattcgtattcatgaagaaaaagtg
caatcaaaagtatttgatgcattaaaaatttcaaaagaagaagcgaaagaaaaatttggc
tttctgcttgatgcccttcaatatggtgcacctccacatggcggcttagcctttggcctt
gatcgcttggtcactttgctagcaggcgctgagtccattcgagatgtgatcgcattccca
aaaacacagcgtgcacagtgtttgctcactaaagcaccgaacgttgtggatgaaaaacaa
ttgcgtgagcttcatattcgtcttcgcacaccacaacctaccacttaa
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