Candidatus Methylopumilus rimovensis: FIT61_00905
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Entry
FIT61_00905 CDS
T10495
Symbol
ruvA
Name
(GenBank) Holliday junction branch migration protein RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
mrk Candidatus Methylopumilus rimovensis
Pathway
mrk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mrk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FIT61_00905 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrk03400
]
FIT61_00905 (ruvA)
DNA repair and recombination proteins [BR:
mrk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FIT61_00905 (ruvA)
RecFOR pathway proteins
FIT61_00905 (ruvA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
5_3_exonuc
IMS_HHH
Transposase_20
HHH_8
SAM_SMF
DUF3701
Motif
Other DBs
NCBI-ProteinID:
QDD13051
UniProt:
A0AAE6KNS4
LinkDB
All DBs
Position
174846..175427
Genome browser
AA seq
193 aa
AA seq
DB search
MIGRISGILLDKTPPHALIDCNGVGYECEVPMSTFYLLPQAGEKVTLLTHFVVREDAQLL
FGFGTHQERLMFRQLLKVNGIGAKSALAILSGLSIEELIQAVSLQEAGLLTRVPGIGKKT
AERLLLELKDKFTLDSALSMKSAGIASISQDVLNALIALGYNERESLNAVKSLDTNLTVN
DGIKQALKYLSKG
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgataggaagaatttccggcattcttttagataaaacaccgcctcacgccttaattgat
tgtaacggtgtaggttatgaatgcgaagtgcccatgagtactttttatttacttcctcaa
gcaggagaaaaagtaacattactcacacattttgtggtgcgagaagatgcccaactctta
tttggttttggtacgcaccaagaacgtttaatgtttagacaacttttaaaagtgaatggt
attggagcaaaatcagcgctcgccattttaagcgggttatccattgaagaacttattcaa
gccgtatcacttcaagaagcgggtcttttaacgcgcgtacctggtattggtaaaaaaaca
gccgaacgattattgttagaactcaaagataaatttacgctcgactcagctttaagtatg
aaaagcgctggtatcgcatcgataagccaagatgtactcaatgcattgattgccttaggc
tacaatgaacgtgaatctttaaatgccgttaaaagtttagatacaaatctcactgtgaat
gacggtattaaacaagctttaaaatatttatctaagggctaa
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