Candidatus Methylopumilus rimovensis: FIT61_01225
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Entry
FIT61_01225 CDS
T10495
Name
(GenBank) formate dehydrogenase
KO
K00124
formate dehydrogenase iron-sulfur subunit
Organism
mrk Candidatus Methylopumilus rimovensis
Pathway
mrk00630
Glyoxylate and dicarboxylate metabolism
mrk00680
Methane metabolism
mrk01100
Metabolic pathways
mrk01120
Microbial metabolism in diverse environments
mrk01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
mrk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FIT61_01225
09102 Energy metabolism
00680 Methane metabolism
FIT61_01225
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Gene cluster
GFIT
Motif
Pfam:
Complex1_51K
NADH_4Fe-4S
SLBB_2
SLBB
Motif
Other DBs
NCBI-ProteinID:
QDD13106
UniProt:
A0AAE6FSN3
LinkDB
All DBs
Position
228594..230147
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AA seq
517 aa
AA seq
DB search
MSIKIFVPIDSTALSLGANEVAEAISKEAQAKKLDIQIIRNSSRGLFWLETLVELETPQG
RIGFGPITPSDVKSLFDADFINGGKHPLALGLVGEIDWLKKQERLTFVRMGITEPANIDQ
YMAHDGFQGLKNALNLKPEAIVETITASGLRGRGGAAFPTGIKWKTVLDTKATQKYIVCN
ADEGDSGTYSDRMIMEGDPFVLIEGMIIAGLAVGATQGYIYLRSEYPHALKTLNEAIRQA
TKIGYLGEDILKSGKSFHLEVRRAAGAYICGEETSMLESLEGKRGLVRFKPPLPAIEGLF
GKPTVVNNVISLATVPIILAKGAKYYQDFGMGKSRGTLPIQLAGNLKRTGLVEKAFGITL
RELLYDFGGGSLSGKPIKAVQVGGPLGAYLPESQFDTPLDYEKFSEIWAVLGHGGIVAFD
ETVNMAKMARYAFDFCAIESCGKCTPCRIGSTRGVEVIDHIMQGHDVKKHVALIRDLSDT
MLNGSLCALGGMTPYPVLSALNHFPKDFGVDAKEPKA
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgagcattaaaatttttgtacctatcgattcaacagcactatctcttggcgctaatgaa
gttgccgaagcaatttcaaaagaagctcaggctaaaaaattagacattcaaatcattcgc
aatagttcgcgcggattattttggctggaaactttggttgaattagaaacgcctcaaggc
cgcataggttttggccctatcactccaagcgatgtgaaatctttatttgatgcagatttt
ataaatggaggtaagcatcctcttgcattaggtcttgtcggagagattgattggttaaaa
aaacaagagcgcttaacttttgttcgtatgggtattaccgagcccgctaatattgatcag
tacatggcgcatgatggatttcaaggcttaaaaaatgcattgaatttgaaacctgaagca
attgtggaaaccattacagcttctggtctgcgaggccgaggtggtgcagcttttcctaca
ggaattaaatggaaaacggtattagataccaaagctacacaaaaatatattgtatgtaat
gcagatgaaggtgattcaggcacgtattcagatcgtatgattatggaaggcgatcccttt
gttttgattgagggtatgattatcgctggccttgctgtaggcgccacacaaggatatatc
tatttacgctccgaatatcctcatgcactaaaaactttaaatgaagccattcgccaagcg
acaaagattggttatctaggcgaagatattttgaagtcaggtaaatcttttcatttagaa
gtaagacgcgcagcaggcgcgtatatttgtggtgaagaaacttcgatgttagagagccta
gaaggcaaaagaggattggtgcgatttaaaccaccgcttcccgcaatcgaaggtctattt
ggtaaacctacggttgtaaacaacgtgatttcattagcgactgtacccattattttggct
aaaggtgctaagtattatcaagattttggtatgggtaaatcacgaggcacgcttcctatt
cagttagcaggaaatttaaagcgcacgggtcttgttgagaaagcctttggtataacttta
agggagcttctttacgattttggcggaggctctttatcaggcaagcctattaaagcagtg
caagtaggcggacccttgggcgcctatttacccgaatcgcaatttgataccccactcgat
tatgaaaaattttctgaaatctgggccgttttgggtcacggcggtattgtggcatttgat
gagacggttaatatggcaaagatggcgcgctatgcatttgatttttgtgcaattgaatct
tgcggaaaatgtacaccttgtcgaattggctcgacgcgcggtgttgaagtgatagatcat
attatgcaagggcatgatgttaagaaacacgtggcattaattagagatctttcagatacc
atgttaaatggttctttatgtgctttaggtggtatgacgccttaccccgttttgagcgct
ttaaatcatttccctaaagactttggggttgatgcaaaagagcccaaggcatag
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