Candidatus Methylopumilus rimovensis: FIT61_01915
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Entry
FIT61_01915 CDS
T10495
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
mrk Candidatus Methylopumilus rimovensis
Brite
KEGG Orthology (KO) [BR:
mrk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrk03021
]
FIT61_01915 (rpoH)
Transcription machinery [BR:
mrk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FIT61_01915 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
IF2_N
HTH_10
HTH_3
UCR_14kD
YdaS_toxin
KORA
RNase_J_b_CASP
Motif
Other DBs
NCBI-ProteinID:
QDD13232
UniProt:
A0AAE6KP44
LinkDB
All DBs
Position
complement(360270..361130)
Genome browser
AA seq
286 aa
AA seq
DB search
MTLDLSLPALGSIDSYDRYMQSIRAIPSLTAEEEIELGMRLKKSNDLEAAKTLILSHLKL
VAKVAKGYAGYGLPQSDLVQEGNIGLMKAVKRFDPERGVRLVSFAIYWIKAEIQEYIVKN
WRLVKTATTKAQRKLFFNLRSMKKTLQPLKSDEINSIAKELNVKPEDVREMEYRFNGNEI
SLDYGSEESEDDVFRPIAYLKDEAPEPSEKMELDQSEGNSLSSLSKALSSLDERSRLILE
ERWLKDKDASTLHELADKLGVSAERIRQIEQAAMKKIKLLMLSSSH
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgactttggatctaagcttacctgcattaggctctatagatagttacgatcgctatatg
caatccattagagccattccctctcttactgccgaagaagagatagaacttggtatgcgt
cttaaaaaatcaaacgaccttgaggcagctaaaacactgattttgtctcacttaaagcta
gtagctaaagtggctaagggctatgccggatatggacttcctcaatcagacttagttcaa
gaaggcaatattggccttatgaaagctgtaaagcgatttgaccctgagagaggtgtaaga
ctagtgtcttttgcaatctactggattaaagcagaaattcaggaatacatcgttaaaaat
tggcgtttagttaaaacagcaacaacaaaggctcagcgtaaattattttttaatttacga
agtatgaaaaaaactctacagcctcttaagtctgatgagatcaattcgatcgctaaagag
ctcaatgttaaacccgaggatgttcgtgaaatggagtatcgttttaatggtaacgaaatt
tcattagattatggttcagaagaatcagaagatgatgtcttcaggcccattgcttatctt
aaagatgaagcgccagaaccttcagaaaaaatggagctagatcaatctgaaggaaatagt
ttatcgtcccttagtaaagcactttcatcgcttgatgaaagaagccgtcttatcctagaa
gaaagatggttaaaagataaagacgcctcaacacttcatgaacttgcagataaacttggt
gtatcagctgaaagaattcgacaaatcgagcaagcagctatgaaaaaaattaaattattg
atgttgtcttccagtcattaa
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