Candidatus Methylopumilus rimovensis: FIT61_02060
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Entry
FIT61_02060 CDS
T10495
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
mrk Candidatus Methylopumilus rimovensis
Pathway
mrk00220
Arginine biosynthesis
mrk00240
Pyrimidine metabolism
mrk00250
Alanine, aspartate and glutamate metabolism
mrk01100
Metabolic pathways
mrk01110
Biosynthesis of secondary metabolites
mrk01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
mrk00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
FIT61_02060 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
FIT61_02060 (carB)
00220 Arginine biosynthesis
FIT61_02060 (carB)
Enzymes [BR:
mrk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
FIT61_02060 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_5
RimK
Motif
Other DBs
NCBI-ProteinID:
QDD13259
UniProt:
A0AAE6KNV2
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All DBs
Position
388664..391867
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AA seq
1067 aa
AA seq
DB search
MPKRKDINSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPINWQIVEKIIAKEKPDVLLPTMGGQTALNCALDLDKYGVLKKYNVELIGASK
EAIDKAEDRQKFKEAMNKIGLGSAKSAIAHSLEEAIQVQAGIGYPAIIRPSFTMGGSGGG
IAYNREEFIAICERGLEASPTKELLIEESLLGWKEYEMEVVRDSQDNCIIICSIENLDPM
GVHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVDTGGSNVQFAINPKDGRMIVIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELKNEITGGATPASFEPSIDYVVTKVP
RFAFEKFPQADSRLTTQMKSVGEVMAIGRTFQESFQKALRGLEIGVDGLDEKTTDQDLII
KELREPGPERIWYVGDAFRLGMSIEEVFGHSNIDPWFLHQIKNIIDIEKDLIGTSLNHLS
KEDLFQLKQKGFSDRRLATLLKTKQEDVRNYRHKHDVRPVYKRVDTCAAEFSTNTAYMYS
TYEEECEANPTLKKKIIVLGGGPNRIGQGIEFDYCCVHAALALREDGFETIMVNCNPETV
STDYDTSDRLYFEPVTLEDVLEIVAIEKPFGVIVQYGGQTPLKLAKDLEKAGVPIIGTSP
DAIDMAEDRERFQKMLNSIGLKQPPNRTARTPEDAIRLAEEIGYPLVVRPSYVLGGRAME
IVHEQAQLERYMREAVKVSHESPVLLDRFLNDALEVDVDALSDGTDVIIGGIMEHIEQAG
VHSGDSACSLPPYSLSKKTQDELRKQTIEMAKALNVVGLMNVQFAIQGDVIYVLEVNPRA
SRTVPFVSKACGLQLAKIAARNMVGITLKSQKVTKEIVPKFFSVKEAVFPFIKFPGVDTI
LGPEMKSTGEVMGLGKTFAEAFIKSQLGSSTKLPKDGKAFISVRREDHHKVVEIAKSLDK
LGFQIVATKGTAKALMDAGLHVESVNKVAEGRPHIVDMIKNNEISFIVNVTEDKRAIADS
YEIRRYALQNKVTYYTTIAGAKAACIGMNFVEEITVTSIQSLHKELT
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagcgtaaagatattaattccatactcattattggtgcaggccctattgttatt
ggtcaagcatgtgagtttgactattcaggcgcacaagcctgtaaagcgcttcgtgaagaa
ggctatcgcgtcatcttagttaattcgaatccagctacgatcatgacagatcctgaaatg
gcggatgcaacttatattgaaccaatcaattggcaaatcgttgaaaaaattattgcaaaa
gaaaaaccagatgtgcttcttcctacaatgggggggcaaactgccctcaattgcgcgctc
gatttagataagtacggtgtgctaaaaaaatataatgttgaattaattggcgcatcgaaa
gaagcgattgataaagcagaagatagacaaaaatttaaagaggctatgaataagattggc
ctaggttcggcaaagtcagccattgcacatagcctagaagaggcaattcaagttcaagca
ggtattggttatccagctattattcgcccatcatttaccatgggaggaagtggcggtggc
attgcatacaatcgtgaagagtttatagcgatctgtgaaagaggactggaagcatccccc
acaaaagaacttcttattgaagagtctttgctcggatggaaagagtatgagatggaagtg
gtgcgtgactctcaagataattgcatcattatttgttcgattgaaaacttagatccaatg
ggcgttcacacgggcgactcgattactgttgctcctgcgcaaacacttaccgataaagaa
tatcaaatcatgcgtaatgcatcgattgcagtcttgcgagaaattggcgtggatacaggt
ggttccaatgtgcaatttgcaatcaatccaaaagatggacgcatgatagtgattgaaatg
aatcctcgtgtatctcgatcatctgccctagcttcaaaagcgacaggtttcccgattgca
aaaattgcagcaaaacttgcagttggctttacattagatgaattaaaaaatgaaattaca
ggtggcgcaacacctgcatcttttgagccaagtattgattacgtagttactaaagtacct
cgatttgcgtttgaaaaatttccacaagcagattcaagacttacgactcagatgaaatct
gtgggcgaagttatggccattggacgtaccttccaagaatctttccaaaaagcattaaga
ggtcttgaaattggtgtggatggcttagatgaaaaaacaacggatcaagatctcatcatt
aaagagttaagagagccaggacctgagcgtatttggtatgttggtgatgcatttagatta
ggcatgtcgattgaagaagtttttggacactccaatattgatccatggttcttacatcaa
attaaaaatattattgatatcgaaaaagatttgataggtacctcacttaatcatctatca
aaagaagatttatttcagttaaagcaaaaagggttttctgatagaaggcttgcaacactt
ttaaaaaccaaacaagaggatgttagaaattatcgtcataagcatgacgtaagaccagta
tataagcgtgtagatacctgcgctgcagaattctcaacgaatacagcttatatgtattca
acatatgaagaagagtgtgaagctaatccaacgcttaagaaaaaaattattgtattaggt
ggcggacctaatcgtattggacaaggtattgaatttgattactgttgtgtgcatgcagca
ttagcattgcgtgaggatggattcgaaaccatcatggtgaattgtaatcctgaaactgta
tccactgattacgacacctcagaccgactttattttgagcccgtgacacttgaagatgta
ttagaaattgtcgctattgaaaaaccatttggcgtcattgtgcaatacggcggacaaacc
ccattaaaattagctaaagatttagaaaaagcaggcgtaccgattattggcacctcacct
gatgccattgatatggcagaagatcgtgagcgcttccaaaaaatgttaaattctattggc
cttaagcagccgcctaatcgcacagcgagaactcctgaagatgcgattcgtttagctgaa
gaaattggctacccacttgtggtaagaccgagttatgttcttggtggtcgtgcgatggaa
attgtacatgagcaagcacaacttgaacgttacatgcgtgaagctgtaaaagtctctcat
gaatctcctgtgcttcttgatcgatttttaaatgatgcacttgaggtggatgtcgatgca
ttatcagatggtacagatgtcattattggcggcattatggagcacatcgaacaggcgggt
gttcactcaggtgactctgcgtgctcactccctccttatagcttgtctaaaaaaactcaa
gatgaattaagaaaacaaactattgagatggcgaaggcgcttaacgttgtaggcttgatg
aatgtgcagtttgcgattcaaggtgatgtaatttatgttctagaagttaatcctagagca
tctcgtaccgttccttttgtatctaaagcatgtgggttgcagttagctaaaattgcagca
cgcaatatggtcggtataactcttaagtcacaaaaagtgacgaaagaaattgtgcctaaa
tttttctctgtcaaagaggctgtgttcccatttattaaattccctggtgtcgatacaatt
ttagggcctgaaatgaaatcaacaggtgaagttatgggcctaggtaaaacatttgcggaa
gcgtttattaaatctcaacttggctcctctacaaaattacctaaagatggaaaggcgttt
atcagtgtgcgccgtgaagaccatcacaaggttgttgagattgcaaaatcattagataaa
ttaggttttcagattgtggcaactaagggcactgcaaaagctttgatggatgcaggactt
catgttgagtcagtcaataaagtagcagagggaagacctcatattgttgatatgattaaa
aataatgagatttcttttatcgtcaatgtcacagaagataaacgtgctattgcagattcg
tatgaaattcgaagatacgcgttacaaaataaagtgacttattacacaactattgcaggc
gccaaagcggcatgcattgggatgaatttcgtcgaagagattactgtcacctctatccaa
agcttgcataaagaacttacttaa
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