Candidatus Methylopumilus rimovensis: FIT61_02130
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Entry
FIT61_02130 CDS
T10495
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
mrk Candidatus Methylopumilus rimovensis
Pathway
mrk00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mrk00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FIT61_02130 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mrk01007
]
FIT61_02130 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mrk03016
]
FIT61_02130 (lysS)
Enzymes [BR:
mrk01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
FIT61_02130 (lysS)
Amino acid related enzymes [BR:
mrk01007
]
Aminoacyl-tRNA synthetase
Class II (A)
FIT61_02130 (lysS)
Transfer RNA biogenesis [BR:
mrk03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
FIT61_02130 (lysS)
Prokaryotic type
Other AARSs
FIT61_02130 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QDD13270
UniProt:
A0AAE6FSN0
LinkDB
All DBs
Position
403344..404864
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AA seq
506 aa
AA seq
DB search
MSEENQSIEQNENHVILERREKLKKLREAGVAFPNDFKPQHFAKTIHEAFGSQGNDTLEP
KAVEVIVAGRMMLKRVMGKASFATLQDGSGRIQLFISKENIKDHDAEIIYENFKHWDLGD
ILGASGVLFKTKTGELSIRVSHLRLLTKSIRPLPEKFHGLADQEVKYRQRYVDLIMSDET
KQTFLTRSKIMSGIRAFMVKHCFNEVETPMLHPIPGGAAAKPFITHHNALDMQMYMRIAP
ELYLKRLVVGGFDRVFEINRNFRNEGLSVRHNPEFTMMEFYAAYTDYNWLMQFTEDCIRD
AAMIALGKTTIEYQGKEINFTDPFERLTIVGAIKKYASQYTDVQLHDEKFLRTELLKFDH
KAFDHVGLGALQLALFEATAESQLWNPTYIIDYPVEVSPLARASDNNKDITERFELFIAG
REIANGFSELNDSEDQAQRFHHQAKAKEAGDLEAMFYDADFIRALEYGMPPTGGCGIGID
RLVMLLTDSPSIRDVILFPHMRPEVN
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagaagaaaatcaatcgatagagcaaaatgaaaatcacgtcatattagagcgacgt
gaaaaattaaaaaaattgagagaggctggcgttgcatttccaaacgacttcaagccccaa
cattttgcaaaaactattcatgaagcgtttggttctcaagggaatgatacgcttgaacct
aaagccgttgaagtcattgtggcaggtcgtatgatgttaaagcgtgtcatgggtaaggca
agcttcgcaacacttcaagatggatcgggacgcatccaactttttatctcaaaagaaaat
attaaagatcatgacgcagaaataatttatgaaaattttaaacactgggatcttggagac
atcttgggtgcgagtggtgtcttatttaaaactaaaacaggtgagctttctattcgcgtg
agtcatttaagattgctcacaaaatcgattcgacccttacctgaaaaatttcatggactt
gcagatcaggaagtgaagtatcgtcagcgttatgttgatctcattatgagcgatgagaca
aagcaaacatttttaacaagatcaaaaatcatgagtggcattcgagcgttcatggtcaag
cattgttttaatgaggtggagacaccgatgctccatccgattccgggcggtgctgcagcg
aaaccatttattacgcaccacaacgcgcttgatatgcaaatgtatatgcgtatagcacct
gaactttatttaaagagattagtggtaggtggttttgatcgtgtgtttgaaatcaatcgt
aattttagaaacgaaggattgagtgtaagacacaacccggaatttactatgatggaattt
tatgcagcctatacagattacaactggctcatgcaattcacagaagattgtatccgtgat
gcagcgatgattgctttaggaaagactaccatcgaatatcaaggtaaagaaattaatttc
acagatccgtttgagcgactcaccatcgtgggcgcaattaagaaatatgcttctcaatat
acagacgttcaacttcatgatgaaaaatttctacgtaccgaacttttgaaattcgatcac
aaagcattcgatcacgtaggtctgggtgctctacagctagcgctttttgaggccacagcc
gaatctcaactttggaatccaacttatattattgattacccagtggaggtatctccgctt
gctcgtgcgtcggataacaataaggacatcacagagcgtttcgagctcttcatcgcaggc
cgtgaaattgcaaatggtttttctgagttgaatgactcagaagatcaagcgcaacgtttc
catcaccaagctaaagcaaaagaagcgggagatcttgaggcgatgttttatgatgctgat
tttattcgggcgcttgaatatggcatgccacccactggcggatgtggtatcggaattgat
cgactcgtgatgcttcttacagatagcccttcgattcgtgatgtgattttattcccgcac
atgcgtcctgaggtaaattag
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