Candidatus Methylopumilus rimovensis: FIT61_02950
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Entry
FIT61_02950 CDS
T10495
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
mrk Candidatus Methylopumilus rimovensis
Pathway
mrk03030
DNA replication
mrk03430
Mismatch repair
mrk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mrk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FIT61_02950
03430 Mismatch repair
FIT61_02950
03440 Homologous recombination
FIT61_02950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mrk03032
]
FIT61_02950
03400 DNA repair and recombination proteins [BR:
mrk03400
]
FIT61_02950
Enzymes [BR:
mrk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FIT61_02950
DNA replication proteins [BR:
mrk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FIT61_02950
DNA repair and recombination proteins [BR:
mrk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FIT61_02950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_14
AAA_16
AAA_18
PIF1
AAA_5
AAA_30
nSTAND3
Rad17
AAA_7
ResIII
AAA_19
TsaE
AAA_2
Sigma54_activ_2
RsgA_GTPase
AAA_28
ABC_tran
RCF1-5-like_lid
NPHP3_N
AAA_24
Torsin
NACHT
Mg_chelatase
AAA_assoc_2
SKI
DUF2115
RNA_helicase
MASE12
DEAD
Motif
Other DBs
NCBI-ProteinID:
QDD13419
UniProt:
A0AAE6FSY8
LinkDB
All DBs
Position
complement(571276..572913)
Genome browser
AA seq
545 aa
AA seq
DB search
MSYQVLARKYRPRSFDTLVGQAHVVQALKNALDQKRLHHAYLFTGTRGVGKTTLARILAK
SLNCEKGISSSPCGICVACTEIDQGRYVDLIEVDAASNTQVDNMRDLLDNAQYAPTQGQF
KIYIIDEVHMLSKNAFNAMLKTLEEPPAHVKFILATTDPQKVPVTVLSRCLQFNLKQMPS
FSISEYLEKILKEESINYEINAIYLIAKAANGSMRDALSILDQGIAYCGGTIEEATIKRM
LGAIDQSYLFNLMHAVIEQDGLKAIEIAKQMNERNLSFDAALLDLANLIQTISVAQAIPD
SLEASYLDRDLVIALTKKISAEQLQLLYQIVILGRRDLYLAPEEFAGFTMTLLRMLSFAP
QDVITSKPIVPAKPEILTQVARPEVISKLDEASSDAFEIKKKIDVIDEIKNKAIKETLSF
NGNWRELVDQLKLGLVKALAQQSELVSFKDNEMILSIADEHKHLLNETYQKKLELSLSEH
FNQRIKLVILQKGANNSPLKQKQEERSTLMKDTEEAMIKDQFVQSLLTEFNAEIIPSSIK
PNQSL
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaagttcttgctcgcaaatatcgccctcgttcgtttgatacgctcgttggt
caagcacatgtcgtgcaagctctcaaaaatgcactcgatcaaaaaagacttcatcatgct
tatctttttacaggtactcgcggtgtaggcaaaacaacgttagcgcgtattcttgcaaaa
tctcttaattgcgaaaaaggtatcagctcatcaccctgcggcatttgtgtggcatgcaca
gaaatagatcaaggacgctacgtagacttaattgaagtggatgctgcatccaatacccaa
gtagataatatgcgagatcttttagataacgcacaatatgcacctacccaagggcaattt
aaaatttatatcatcgatgaagtgcatatgctttcaaaaaatgcatttaatgcgatgttg
aaaacactagaagagccaccagcgcatgttaaatttattttagcaacgactgacccacaa
aaagtccctgtcactgttttatcaagatgcttacaatttaatttaaaacaaatgccttct
ttttctatttcagaatatctagaaaaaatattaaaagaagagtccattaattatgaaata
aatgcgatttatctcatcgcaaaagcagccaatggaagtatgcgtgatgcattatcaatt
ctcgatcaagggattgcttattgtggcggcactattgaagaagctacgatcaagagaatg
ttgggcgctattgaccagtcatacttattcaatttaatgcatgcagtcatagagcaagac
ggccttaaagcgatcgagattgcaaaacaaatgaatgaaagaaatctttcgtttgatgca
gcacttcttgatcttgctaatctcattcaaaccattagcgttgctcaagctatcccagat
agtttagaagcttcatatcttgatcgcgatctagtgatcgcattaacaaaaaaaataagt
gcagaacaattacagcttttatatcaaattgttatattaggtcgacgagatctttattta
gcgcctgaagagtttgctggatttaccatgacacttttaagaatgctttcttttgcccct
caggatgttattacttctaaaccgatagttcctgcaaaaccagagattctaactcaagta
gcaaggccagaagtgatttcaaaactcgatgaagcctcttctgatgcgtttgagattaaa
aaaaaaattgatgttatagatgaaattaaaaataaagcaataaaagagacattatcattc
aacggaaactggcgcgagcttgtagatcaattgaaattgggcttagtgaaagccctggca
caacaatcagaacttgtcagctttaaagataatgagatgattttatctattgcagatgaa
cataaacatcttcttaatgaaacttatcaaaagaaattagaattaagtttatctgagcat
tttaatcaacgcatcaaacttgtaatcttacaaaaaggtgccaataattcaccacttaaa
caaaaacaagaagaacgctcaacactcatgaaagacacagaagaagctatgataaaagat
cagttcgtacaatcattactaacagaatttaatgctgaaattattccatcgagcattaaa
cctaatcaatctttataa
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