Candidatus Methylopumilus rimovensis: FIT61_03215
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Entry
FIT61_03215 CDS
T10495
Name
(GenBank) rRNA pseudouridine synthase
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
mrk Candidatus Methylopumilus rimovensis
Brite
KEGG Orthology (KO) [BR:
mrk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mrk03009
]
FIT61_03215
Enzymes [BR:
mrk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
FIT61_03215
Ribosome biogenesis [BR:
mrk03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FIT61_03215
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
QDD13464
UniProt:
A0AAE6FT17
LinkDB
All DBs
Position
630176..630913
Genome browser
AA seq
245 aa
AA seq
DB search
MEEAVRISKILSELGLCSRREADTYIEQGLVTLDGKVVTELGTRAYRSQKVELKKQAAIQ
QSSKVTVILNKPVGYISHLDDDKAFRPAASLIIQDNFQVSKQHSSRNPRFNTDGLAPAGR
LDIDSSGLLVLTQDGRIAKTIIGEQSVIEKEYLVRVEGKLVNKGLDLLRHGLSLDGYKLK
PAEVEWQNDDQLRFVLIEGRNRQIRRMCELVGLHVIGLKRVRIGNVLLGDLPTGMWRFLD
QKEKF
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagccgttcgtatttctaaaattttatctgaacttggcctttgttcaagaaga
gaagctgatacttatatcgaacaaggactcgtgacgcttgatggtaaagttgtaactgaa
ttaggcacgcgcgcatatcgttcccaaaaagttgaattaaaaaaacaagcagccattcaa
cagtcatccaaagtcacagttatcttaaataagcctgtaggttatatttcgcatcttgat
gatgataaagcttttagacccgctgcaagtctcattattcaagataactttcaagtttcg
aaacaacattcatctcgtaacccaagatttaacactgatggattagctcccgccggaagg
cttgatattgattcttctggtttattggttctcactcaagatggaagaattgctaaaaca
attattggcgaacaaagtgtgattgaaaaagaatatttagttcgagttgaaggaaagctg
gttaacaaaggcttggatttattaaggcatggtctttcactagatggttataagctaaag
ccagctgaagttgaatggcagaatgatgatcaactgcgttttgttttaatagaaggccga
aatagacaaatcagaagaatgtgcgagcttgttggccttcatgtcattggattaaaaaga
gtgaggattggtaatgttttactaggtgacttaccaacaggaatgtggcgatttttagat
cagaaagaaaaattttaa
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