Candidatus Methylopumilus rimovensis: FIT61_03590
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Entry
FIT61_03590 CDS
T10495
Name
(GenBank) CysB family HTH-type transcriptional regulator
KO
K13634
LysR family transcriptional regulator, cys regulon transcriptional activator
Organism
mrk Candidatus Methylopumilus rimovensis
Brite
KEGG Orthology (KO) [BR:
mrk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mrk03000
]
FIT61_03590
Transcription factors [BR:
mrk03000
]
Prokaryotic type
Helix-turn-helix
LysR family
FIT61_03590
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
MarR_2
HTH_30
HTH_20
LIM_FHL2-3_N
Motif
Other DBs
NCBI-ProteinID:
QDD13531
UniProt:
A0AAE6KP71
LinkDB
All DBs
Position
complement(699946..700878)
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AA seq
310 aa
AA seq
DB search
MKLQQLRCIHEVVKNGFSISKAAEALHTSQPGVSKQIQLLEEEVGLHIFLRHGKRLVGLT
EPGQHVYKRISEVIREIKSIKQVSDEFSHSNVGELTIATTHTQARYKLPSVVQAFMTKYP
EVKLNIHQGNPTQVTDQVVKGEADIGIATESISKNEKLFCIPCYTWNRCLVMPAKHPLAK
EKSISLAKLASYPIITYDYAFTGSTIVSKVFHDSGLTPNIVLTAIDADVIKTYVNLGLGI
GLIAQMAYDSKRDQGLVSIDVSHLFPTSTTYLGIRRDVFLRGFMYDFIEMFTPQFTKQTI
KKMMLEQDNI
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaaactccagcaattacgatgtatccatgaggtagttaaaaatggttttagtatatct
aaagccgcagaagcgctgcacacctcacagcctggtgtgagtaaacagattcaattgtta
gaagaagaagtaggcctccacattttcttgagacatggtaagcgtcttgtagggctcact
gaaccaggacagcatgtttataagcgtattagcgaagtaatacgcgaaattaaaagcatt
aaacaagtcagcgatgaatttagtcattcaaatgttggtgaattaacaattgcaacaaca
cacacgcaagcacgttataaattaccgagcgtcgttcaagcatttatgactaaatatcca
gaagtaaaacttaatattcaccaaggaaacccaacgcaggtcaccgatcaagttgttaaa
ggtgaggcggatataggcatagctactgaatcaattagtaaaaatgaaaaattattttgt
ataccctgctatacatggaatcgttgtttagtgatgccagcaaagcatcctttagctaaa
gaaaaatcaatttctcttgcgaaacttgccagttatcccattatcacttatgactatgca
tttactggaagtactattgtttcgaaagtttttcatgattcaggactcacgccgaatatt
gttttaactgccattgatgctgatgtgattaaaacatatgtaaatttgggtttaggtata
ggacttattgctcagatggcttacgattctaaaagagatcaaggacttgtaagtattgat
gtaagtcatttatttcccacaagtacaacttatcttggcatcagacgtgatgtattttta
agaggttttatgtatgactttattgaaatgtttacacctcaatttacaaaacaaaccatc
aagaaaatgatgttagagcaagataatatttga
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