Candidatus Methylopumilus rimovensis: FIT61_04010
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Entry
FIT61_04010 CDS
T10495
Name
(GenBank) lysine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
mrk Candidatus Methylopumilus rimovensis
Pathway
mrk00330
Arginine and proline metabolism
mrk01100
Metabolic pathways
mrk01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
mrk00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
FIT61_04010
Enzymes [BR:
mrk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
FIT61_04010
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QDD13608
UniProt:
A0AAE6FT72
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All DBs
Position
795395..797635
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AA seq
746 aa
AA seq
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MKFNFPVVIIDEDFKSENSSGLGIRVLAKAIEEENFEVLGVTSYGDLSSFAQQQSRASAF
ILSIDDEEFVEENQTALEQLKNFVDEIRFRNEEIPIFLHGETRTSRHIPNEILRELNGFI
HMHEDTPEFVARYIVREARTYLDSLPPPFFKALTHYAGDGSYSWHCPGHSGGVAFLKSPV
GQMFHQFFGENMLRADVCNAVDELGQLLDHTGPVGASERNAARIYNSDHLYFVTNGTSTS
NKMVWHSTVAPGDIVIVDRNCHKSVLHSIIMTGAIPIFLMPTRNHFGIIGPIPKKEFEWK
NIQEKIQKNPFITNKKDKPRVLTITQSTYDGILYNVEEIKEMLDGKIDSLHFDEAWLPHA
TFHDFYGDYHAIGADRPRCKDSLIFSTQSTHKLLAGLSQASQILVQDAEKNKLDREVFNE
SFLMHSSTSPQYSIIASCDVAAAMMEEPGGKALVEESLMEALDFRRAMRKVDIEWGSDWW
FKVWGPNDLSDEGLEDRDAWMLNANDHWHGFGNLADGFNMLDPIKATIITPGLNVDGEFS
DEFGIPASIVTKYLAEHGVIVEKTGLYSFFIMFTIGITKGRWNTLVAALQQFKDDYDKNQ
PLWKVLPEFIQKQPSYERIGLRDLCTQIHEIYKKHDIARLTTEMYLSDMVPAMKPTDAFS
KMAHKEIERVAIDDLEGRITAVLLTPYPPGIPLLIPGERFNKIIVDYLKFARDFNEKFPG
FETDNHGLVKQKIDGKAHYFVDCVSI
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaacttccccgtagtcatcattgacgaagacttcaaatctgaaaactcatct
ggtcttggtattagagttttagcaaaagcaatcgaggaagaaaattttgaagtgctaggt
gttacaagttatggtgacctttcttcatttgctcaacaacaaagtcgagcttctgcattt
attttatctattgatgatgaagagtttgttgaagaaaatcagactgcccttgaacaatta
aaaaatttcgtagatgaaattagatttcgcaatgaagaaattccaatatttctccatggt
gaaacaagaacaagtcgtcacattccaaacgagatcttaagagagcttaatggttttatt
cacatgcatgaggatacgcctgagtttgtagctcgttatattgtgcgtgaagctagaacc
tatttagatagcctgcccccaccattctttaaagctcttactcattatgcaggcgacggt
tcatactcctggcattgtcctggccactcaggtggtgttgcttttctaaaatcacctgtc
ggccaaatgtttcaccaattttttggtgaaaacatgcttcgagctgacgtatgcaatgca
gtagatgaattaggacaattacttgaccatacaggtcctgtaggtgcttcagaaagaaat
gcagcgcgtatatataactctgatcatctctatttcgtcacaaacggtacatcgacgtct
aataagatggtttggcattcaacagtagcgccaggtgacatcgttatcgtagatagaaat
tgccataaatcagtattgcattccattattatgactggcgccattccaattttcttaatg
ccaacaagaaatcactttggcattattggacctatacctaaaaaagaatttgaatggaaa
aatattcaagaaaaaattcaaaagaatccattcatcaccaataaaaaagacaagccacgt
gtattaacaattacacaatcaacttatgacggcatcctttataacgtagaagaaattaaa
gaaatgttagatggaaaaattgattcgcttcattttgatgaggcttggttgccacatgca
acattccatgacttttatggcgactatcatgctattggcgctgaccgtccacgctgtaaa
gatagtctcattttctcaacgcaatctacacacaaacttttagcaggcttgagtcaagcg
tctcaaattcttgtacaggatgcagaaaaaaataaactggatcgtgaagtctttaacgaa
tccttcttgatgcatagctccaccagtccacaatattcaatcattgcaagttgcgatgta
gctgctgcaatgatggaagagcctggtggtaaagcacttgtggaagaatcactaatggaa
gcattggactttagacgcgccatgcgaaaagtagatattgaatggggatctgactggtgg
tttaaagtttggggaccgaatgatttatcagatgaaggtcttgaagatcgggatgcttgg
atgttaaatgccaatgatcattggcatggatttggtaatcttgctgatggctttaatatg
ctcgacccaattaaagcaacaatcattaccccaggactcaatgttgatggtgagttttct
gacgagtttggaataccagcctctattgtcaccaaatatttagcagaacacggagttatt
gtagaaaaaactggtctctactcattctttatcatgtttacgattggtattactaaaggt
cgatggaatacactggttgcagcgcttcaacaatttaaagatgattacgacaagaatcaa
cctttatggaaagtattacctgagtttattcaaaagcaaccaagctatgagcgtattgga
ttaagagatttatgcacacagattcatgagatctataaaaaacatgacattgcgagactg
acaactgaaatgtatctctctgatatggtccctgcaatgaagccaacagatgctttttca
aaaatggcccataaagaaattgaacgtgttgcgattgatgatctagaaggcagaattaca
gcggtgcttcttacaccatatccaccgggaattccgcttctcatccctggcgagcgtttt
aacaaaattattgtggattatttaaaatttgcacgagattttaatgagaaattcccagga
tttgaaacagataatcacggattagtaaaacaaaagattgacggcaaggcgcactatttt
gtagattgcgtatctatttga
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