Candidatus Methylopumilus rimovensis: FIT61_04435
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Entry
FIT61_04435 CDS
T10495
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
mrk Candidatus Methylopumilus rimovensis
Pathway
mrk00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mrk00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FIT61_04435
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mrk01007
]
FIT61_04435
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mrk03016
]
FIT61_04435
Enzymes [BR:
mrk01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
FIT61_04435
Amino acid related enzymes [BR:
mrk01007
]
Aminoacyl-tRNA synthetase
Class II (U)
FIT61_04435
Transfer RNA biogenesis [BR:
mrk03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
FIT61_04435
Prokaryotic type
FIT61_04435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
TraH_VirB8-like
Motif
Other DBs
NCBI-ProteinID:
QDD13686
UniProt:
A0AAE6FTE2
LinkDB
All DBs
Position
complement(874079..876430)
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AA seq
783 aa
AA seq
DB search
MQFSENWLRSYVNTSLDSDGLNHVMIMAGLDVDDSHPLGASFSHVVVGEIVAIKKHPDAD
RLQVCDVNIGDKSLQIVCGASNARQGIKVACALVGAKLPSIDIKEAKVRGVESFGMLCSL
KELGLAEEADGILELNHDLKNGTDLRVALDLNDQITTLKLTPNRSDCLSVWGVAREVAAI
SASSLSPIHYDVNPIKQSEKKNVIIEEKEACPRYCGRIIKNVDNTKSLPEWMTSRLERSN
IKSISPIVDITNYVLLEIGQPLHAFDHEKLQGDVTVRFAKPEEPIHLLNDTKIKLSKKDL
VIADQSGAIAFAGVMGGMPSSVTDNTQTIFLESAFFDPIVIAGKARAYNLSTDSSYRFER
GVDFSNTRHALERATSLIIEYCGGAAGEITEVLNALPKRNEIHLRLKKLNAILGIEVPSQ
DVERIFIQLGFEVNKTIEGFKVTPPSYRFDIAIEEDLIEEVVRLYGYDKIPSHHPLSHQV
MLPTSGTYHRDLKEALTSRGFYEVVTYSFIEDEVEKSLHGNANPIQLQNPIASQMSTMRS
SLWGSHLEVLTYNLNRQVSRLNIFEIAQTFHGVKKDFIETEVISGLSYGSFMPEQWADKI
RDIDFYDIKAHVEALTSKQLTFKRSDKTPLALHPGQSAEVILDAQSIGWVGKLHPKWQQH
FSLPKAPFIFELKIEKLLEDKVFKYEEISKFLPVRRDIAVVVDDSVEVDSILDAVNKAKI
PFLNHMALFDLYQGKGIAENKKSVAFLILMQDTSKTLVDSEADSSVSKIVELLEKQFGAT
LRN
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgcaattttctgaaaactggttaaggtcatacgttaatacatcactcgacagtgatggg
cttaaccacgtcatgattatggcaggattagatgttgatgattctcatcctctaggagca
tcgtttagccatgttgtagtcggtgagattgtagctattaaaaaacatcctgatgcagat
cgacttcaagtatgtgatgtcaacattggtgataagtcattacaaattgtttgtggtgca
tctaatgcgagacaaggcattaaagtagcatgtgctttagtaggcgctaaattaccctcg
attgatatcaaagaagcaaaagtacgaggagttgaatcgttcggtatgctttgctcatta
aaggaattaggattagctgaagaagctgatggtattctggagctcaaccatgatttaaaa
aacggtacagatttaagagtggcgcttgatcttaatgatcaaattacaacattaaaatta
acacctaatcgaagtgattgtttaagtgtttggggtgtagctcgagaagtggcagccatt
agtgcatcttcactttctcccatccattatgatgttaatccaatcaagcaaagcgaaaag
aaaaatgtaatcattgaagaaaaagaagcatgtccgcgttattgtggtcgcatcattaaa
aatgtagataacacaaaatcgttgcctgaatggatgacttcaagacttgagcgttccaat
ataaagtcaatcagtcctattgtcgatattacgaattatgtgttgcttgaaattggacag
ccactgcatgcatttgaccatgaaaaattacaaggtgatgtcacggttagattcgcaaag
cctgaagagccgatacatcttctcaatgatacaaaaattaaattatcaaaaaaagatcta
gtgattgcagatcaatcaggcgcaattgcatttgcaggggtaatgggtggcatgccttca
tcagtcaccgataatactcaaactattttcttggaaagtgctttttttgatcccattgtg
attgctggtaaagctagagcatataacttatctacagactcatcttatcgttttgaacgc
ggcgtagatttttctaatacgcgacatgcactagaacgtgcaacatctcttattattgaa
tactgtggtggagcagcaggagagattacagaagttttaaatgctttaccaaagcgcaat
gaaattcatctaagacttaaaaaattaaatgctatcttaggtattgaagttcctagccaa
gatgttgagcgaatatttatacaattaggttttgaagtgaataaaacaatcgaaggattt
aaagtcacacccccttcttatcgctttgatattgctattgaagaagatctgattgaggaa
gttgtgcgattgtatggctacgataaaattccttcacatcatcctctgagccatcaagtg
atgttacctacatccggcacttatcatcgtgaccttaaagaagcactcacatctcgaggt
ttttatgaggtagtgacttatagctttattgaagatgaggttgagaaatcattacatgga
aatgccaatccgattcaattacagaatccaattgcaagccagatgtcgacgatgcgatca
tctttatggggtagtcaccttgaagttttaacttacaatttaaatcgccaagtatcgcgt
ttaaatatttttgagatcgctcaaaccttccatggtgtaaaaaaagattttattgagacc
gaagtgatatcaggactcagttacggtagttttatgcctgagcagtgggctgacaaaatt
cgcgatattgatttttatgacataaaagcacatgttgaagctttgacgtctaaacaactc
acatttaaaagaagtgataaaactccattagcgcttcatccaggacaatcagcagaagtc
attttggacgctcagtcgataggttgggtgggtaaattacatccaaaatggcagcaacac
ttttccctccctaaagccccttttatttttgaattaaaaatagagaagcttttagaagac
aaggtatttaaatacgaagaaatctcaaaattcctcccggtaaggcgtgatattgctgtt
gtggtagacgactcagtcgaggtggattcgattttagatgcggtaaataaggctaaaatt
ccgttcttaaatcatatggctttattcgatctttaccaaggaaaaggcatcgccgaaaac
aaaaaaagtgttgcatttctgatacttatgcaggatacttcaaagacattagttgatagt
gaagctgattcttctgtatcaaaaatcgttgaattacttgaaaaacaatttggcgcaacg
ctccgcaactaa
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