Candidatus Methylopumilus rimovensis: FIT61_04980
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Entry
FIT61_04980 CDS
T10495
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
mrk Candidatus Methylopumilus rimovensis
Pathway
mrk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mrk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FIT61_04980 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrk03400
]
FIT61_04980 (xseB)
Enzymes [BR:
mrk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
FIT61_04980 (xseB)
DNA repair and recombination proteins [BR:
mrk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
FIT61_04980 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
DUF4533
DnaB_C
AroM
XhlA
DUF3496
Motif
Other DBs
NCBI-ProteinID:
QDD13781
UniProt:
A0AAE6FTY5
LinkDB
All DBs
Position
969334..969552
Genome browser
AA seq
72 aa
AA seq
DB search
MDKNSLETNLKELESIVSKMEQGDMALEESIKSYEKGMVLLKLCQDSLKEIEHKVLVLSA
ENTLEQFKSANE
NT seq
219 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaattcactagaaacaaaccttaaagaacttgaatctattgtttcaaaaatg
gaacaaggtgatatggcgctcgaggaatctataaaatcttatgaaaaaggaatggttctt
cttaaattatgtcaagactctctaaaagaaattgaacataaagttttagtgctttctgca
gaaaatacactcgaacaattcaagtcagctaatgaataa
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