Candidatus Methylopumilus rimovensis: FIT61_05175
Help
Entry
FIT61_05175 CDS
T10495
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
mrk Candidatus Methylopumilus rimovensis
Brite
KEGG Orthology (KO) [BR:
mrk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
mrk03110
]
FIT61_05175 (clpB)
Chaperones and folding catalysts [BR:
mrk03110
]
Heat shock proteins
HSP100
FIT61_05175 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
Clp_N
AAA_5
AAA_22
AAA_16
AAA_14
Sigma54_activat
NBD_SMAX1
nSTAND3
bpMoxR
IstB_IS21
AAA_24
TniB
AAA_7
AAA_25
NACHT
ATPase_2
DUF815
RVT_N
Motif
Other DBs
NCBI-ProteinID:
QDD13818
UniProt:
A0AAE6FTK8
LinkDB
All DBs
Position
complement(1007322..1009904)
Genome browser
AA seq
860 aa
AA seq
DB search
MRFDKLTTKFQQAFADAQSLANANDNPNIEPVHMVQALLDQDDGSTASLLSYAGVNLAPL
KVSLKSTIDKLPKAESNQGEISISRDLNNLLNLTEKNSQKLGDAYISSEMFLLALADDKS
DVAKLLKQHGLTKAALEKAVQSVRGNDKINSQDADGQREALKKYTIDLTERARIGKLDPV
IGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKNKRVLSL
DMAALLAGAKYRGDFEERLKAVLKEIALDEGQTIVFIDEIHTMVGAGKTEGAMDAGNMLK
PALARGELHCVGATTLDEYRKYIEKDAALERRFQKVLVDEPSMEATIAILRGLQEKYELH
HNVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASRIKMEIDSKPEVLDKLERRLI
QLKIEREAMRREKDEASKKRFELIEDEIKKLEKEFSNLEEIWKSEKAQLQGSKHIKEEIE
QIRLKIEEATRKGEWQKVSELQYGKLPELETQLKQAAKAETAKTQANRMLRTEVGADEIA
EVVSRATGIPVAKMMQGERDKLLKMEDKLHERVVGQDEAVRVVSDAIRRSRSGLSDPNRP
YGSFLFLGPTGVGKTELCKSLANFLFDSPDHLIRIDMSEFMEKHSVARLIGAPPGYVGYE
EGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIIMT
SNLASNMIQAMSGDDYQVIKLAVMGEVKNHFRPEFINRIDEVVVFHALADDHVKSIAAIQ
LQYLKDRLAQLEMKVDITDAALEEISKEGFDPVYGARPLKRAIQSEIENPLAKEILAGHF
MAKDTIKIDSVSGKLKFTKI
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttgataaattgaccacgaagtttcagcaagcatttgctgatgcacagagtctt
gcaaatgcgaatgacaatcctaatatcgagccagttcacatggttcaagccttgcttgac
caagacgacggaagtacagcttcacttttatcttatgcgggtgttaatttagcacctctt
aaagtgtcgcttaaatcaactattgataaattacctaaagctgagagtaatcaaggtgaa
atttcaatatctcgagatttaaataatcttttaaatttaacagaaaaaaattcacaaaaa
ctaggtgatgcttatatctcaagcgagatgtttttattagcattggctgatgataaaagt
gatgtggctaaattattaaaacaacatggtttaaccaaagcggctttagaaaaagctgtt
caatctgtaagaggtaatgacaaaataaattctcaagatgcagacggccaaagagaagcc
ttaaagaaatatacaattgatttaacagaacgagctcgcatcggtaagcttgatccagtg
attggtcgtgatgatgaaatccgtcgcactattcaagttttacaacgacgtacgaaaaat
aaccctgtattgattggtgagcctggtgtgggtaaaacagcgattgtagagggtttggcg
caacgcatcgtcaatggtgaagtccctgactcattaaaaaataaacgagtgctatcactt
gatatggcagcattattagcaggagcaaaataccgaggagattttgaggaacgcttaaaa
gccgttttaaaagaaattgcgttggatgaaggtcaaacgatagtttttatcgatgagatc
catacgatggtaggcgctggtaagaccgagggtgctatggatgcaggcaatatgttaaaa
cctgcattagcacgtggcgaacttcattgtgtaggcgctacgactctagatgaatatcga
aaatatattgagaaagatgctgcattagaaagacgattccaaaaagtgctcgtagatgaa
ccttctatggaggctactattgcaatacttcgtggcctgcaagaaaaatatgagcttcat
cacaatgtcgagattactgatcctgcgattgtagctgcagcagaattatcacatcgatat
attacggatcgattcttacctgataaggcaattgacctaattgatgaagctgcatctcgt
atcaagatggagattgattctaaaccagaagttttagataaattagaacgtcgacttatt
caattaaaaattgaacgtgaagctatgcgtcgcgaaaaagatgaagcgtctaaaaaacgt
tttgagttgattgaagatgaaattaagaagcttgaaaaagaatttagcaatttggaagaa
atttggaaatcagaaaaagcacaacttcaaggctcaaaacatatcaaagaagagattgaa
caaatacgtttaaaaattgaagaggcaacacgaaaaggtgaatggcaaaaagtgtctgag
ttgcagtatggaaaattaccagaattagagacgcaacttaaacaagctgctaaagctgaa
actgccaagacccaagcaaatcgcatgcttcgaaccgaagtgggggctgatgaaatagca
gaagtcgtgagtcgtgccacaggcattcctgtggcaaaaatgatgcaaggtgaacgcgat
aagcttttaaaaatggaagataaactccatgagcgtgtcgtaggacaagatgaggctgtt
cgtgtagtgtccgatgcaattcgtcgttcaagatcaggtttaagtgatcctaatcgacct
tatggctccttccttttcttaggacccacaggcgtcggtaaaaccgagctatgtaaatca
ttagctaactttttatttgactccccagatcacttaatcagaattgatatgagtgagttt
atggagaaacattctgtagctcgattaattggagctcccccaggatacgttggctatgaa
gaaggtggttatctcactgaagcagtgagacgtaaaccttacagtgtcattttattagac
gaggtagaaaaagcacatccagatgtgtttaatgtgcttcttcaagtattagacgatgga
cgtttaacagatggacaaggacgaactgtagattttaaaaatacagtgattatcatgaca
tctaacttagcttctaacatgatccaagcgatgtcgggtgatgattatcaggtcattaaa
ttagctgtgatgggtgaagttaaaaatcatttccgtccagagttcattaatcgtattgat
gaagtggttgtcttccacgcgttagcagatgatcatgtgaaatcgattgcagcaattcag
ttacaatatttaaaagatcgattggcacaacttgaaatgaaagtggacattacggatgct
gccttagaagaaatttccaaagaaggatttgatccagtctatggtgcaagacctttaaag
agagcgattcaatctgaaattgaaaatccactcgctaaagaaattttagcaggccatttt
atggcaaaagataccattaagattgatagtgtttcaggtaaacttaaatttactaaaatt
taa
DBGET
integrated database retrieval system