Candidatus Methylopumilus rimovensis: FIT61_05580
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Entry
FIT61_05580 CDS
T10495
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mrk Candidatus Methylopumilus rimovensis
Pathway
mrk03030
DNA replication
mrk03410
Base excision repair
mrk03420
Nucleotide excision repair
mrk03440
Homologous recombination
Brite
Enzymes [BR:
mrk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FIT61_05580 (polA)
DNA replication proteins [BR:
mrk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FIT61_05580 (polA)
DNA repair and recombination proteins [BR:
mrk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FIT61_05580 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FIT61_05580 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QDD13895
UniProt:
A0AAE6FTH3
LinkDB
All DBs
Position
1083647..1086376
Genome browser
AA seq
909 aa
AA seq
DB search
MKTLLLVDGSSYLYRAFHGLPDLRNSRQEPTGAIYGVLNMLRKLHKEFPSDYSACVFDAK
GKTFRNDLYPEYKANRSAMPDDLRAQIQPLHEAITAMGWPIIIQEGVEADDVIGTLCKEA
TQHQFNVVVSTGDKDLAQLVNDHVTLINTMTNEKLDIEGVKNKFGLMPNQIIDYLTLIGD
TSDNVPGVEKVGPKTALKWLNEYQTLDNIVTHASQFSGVVGENLRKALDWIPKAKDLITI
RCDLDIDKNWDNLKAKTQDLSALENLYQRFEFKNWLNEIKEDSPQIISSSKSDEEKVSIK
SPSHFISKIKYDTIFEETLLHAWLEKIKEKKYVCVDTETNSLDPMQAKIVGISMAVTPGE
AAYIPLAHDYPGAPQQLSLNAVLNLLKPILEDEKIKKIGQNLKYDAHVFLNHDICLKGIK
HDTMLQSYVTESHQSHGMDNLSLRHLGHTCVSYEEVAGKGVNQLRFNEVDIDVASHYSSE
DADITLQLNQFFNPVIENDAPLKFIYESIEMPTAEVLLKIERNGVLIDDKKLNEQSHEIG
KKILLLEEEAYQLAGQPFNLASPKQLQDILFIKLGIKSLKKTPSGAPSTDEDVLQELALD
YPLPKLLLEHRSLSKLKSTYTDKLPKMINPNTGRIHTSYNQAVAITGRLASSDPNLQNIP
IRTLEGRKIREAFIANKGSSILSADYSQIELRIMAHLSQDKRLLDAFKNNEDIHKSTAAE
IFGCDLNSVSNEQRRYAKVINFGLIYGMSVFGLSKSLGIERSAAANYIETYFARYPGVKK
YMENAKLFAKDKGYVETLFGRRLWIPEINGSNGIRRAAAERAAINAPMQGTAADLIKLAM
IAVDQWLSQNAHLKTKMIMQVHDELVFEVPQNEIEILQKELPRLMEGVAKLDIPLIVDIG
VGLNWDAAH
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacactattattggtcgatggctcttcttatctctatcgggcatttcacggattg
ccagatcttagaaacagtcgccaagaacctactggggctatttacggcgttttaaatatg
ctccgaaaacttcataaagagtttccttcagattatagcgcttgcgtttttgatgcaaaa
ggaaaaactttcagaaatgatctgtaccctgagtataaagctaatcgctcggcgatgcct
gacgatttaagagctcaaatccaaccgcttcatgaagcaattacagcgatgggctggcct
attattattcaagaaggtgttgaagctgatgatgtaattggcacattatgcaaagaagct
acccaacatcaatttaatgttgtcgtttctacaggtgataaggacttagctcagcttgta
aatgaccatgtcactttaattaatacgatgacgaacgaaaaactcgatatcgaaggcgtc
aaaaataaatttgggttgatgccgaatcaaattattgattatctaacacttattggagac
acctcagataacgtgcccggtgttgaaaaggtaggtcctaaaactgcattgaaatggctt
aatgaatatcaaacgctcgacaatatcgtaacgcatgcttctcaattctcaggggtagtc
ggtgaaaatttaagaaaagcactcgattggattcctaaggctaaagatctaattacgatt
cgatgtgatttagatatcgataaaaattgggataatttaaaagctaaaacacaagactta
tccgcgttagaaaatttataccaaaggtttgaatttaagaattggcttaatgaaattaaa
gaagatagcccccagataatctcatcaagtaaaagtgatgaagaaaaagtatccattaaa
tcaccaagtcattttatttctaaaattaaatatgacacaatatttgaagaaactttatta
catgcatggctagaaaaaattaaagaaaaaaaatatgtttgtgtcgacacggaaacaaac
tctcttgacccaatgcaagcaaaaattgtaggtatatctatggcagtgactccaggggaa
gcagcctacattcctttggcacatgattatcctggagcccctcaacagttatcacttaat
gctgtattaaatttattgaagcccattttagaagatgaaaagatcaagaaaattgggcaa
aacttaaagtacgatgcgcatgtttttttaaaccacgatatatgtcttaaaggtattaag
cacgatacgatgctacaaagctatgtgacagaaagtcatcaaagtcatggcatggataat
ttaagcttgaggcatctaggacatacctgtgtaagttacgaagaagttgcaggcaaaggt
gtaaatcaacttagatttaatgaagtcgatattgatgtggcatctcattattcatctgaa
gatgccgatattactttgcaattaaatcaattttttaatcctgtaattgaaaatgatgcg
ccactaaaattcatttatgaaagcattgaaatgcccaccgcagaagtgcttttaaagatt
gaaagaaatggtgtgcttatagatgacaaaaaattaaatgagcaaagccatgaaattgga
aaaaaaattctgctacttgaagaggaggcttaccaattagcgggacaacctttcaacctc
gcatcacctaaacaattacaagatattttatttatcaaattaggtattaagtctttaaaa
aaaacaccttcaggagctccctctactgacgaagacgtcttgcaagaattagctcttgac
tatcctttgcctaaacttcttcttgagcatcgcagtctgtctaaactcaaatcaacttac
acagataaattaccaaaaatgattaatcctaatactgggcgcattcataccagctacaac
caagcagtggcaattacaggacgtcttgcaagttcagatcctaatttgcaaaatatccct
atcagaacattagaaggtagaaaaataagagaagcatttattgcaaacaaaggatcatca
attttatctgcagactattcacaaatcgaactgagaattatggctcacttatctcaagac
aaaagattacttgatgcatttaagaataatgaggatatacataaatctacggcagctgaa
atctttgggtgtgatctgaatagtgtttctaatgaacaaagacgttatgccaaagtcatt
aattttggtttgatctatggaatgagtgtttttggtttatcgaaatcactcggcattgaa
cgcagcgctgctgcaaattacatagaaacttattttgcccgatatcctggtgttaaaaaa
tacatggaaaatgcaaaattatttgctaaagataaaggttatgtagagacactttttgga
aggcgattatggattccagaaattaatggttcgaatggtattagaagagctgcggcagaa
agagcagcgattaatgctcctatgcaaggcactgcagccgacctcattaaattagcaatg
attgccgttgatcaatggctgtctcaaaatgcacacttaaaaacaaaaatgattatgcaa
gtacacgatgagcttgtgtttgaagtaccccaaaatgaaattgaaatattacaaaaagaa
ttgcctcgactaatggagggtgttgcaaaactagatattcctcttatcgtcgatattggt
gttggactgaactgggatgcggcacattaa
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