Candidatus Methylopumilus rimovensis: FIT61_06230 Help Entry FIT61_06230       CDS       T10495                                  Symbol rpoN Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism mrk  Candidatus Methylopumilus rimovensis Pathway mrk02020   Two-component system mrk02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:mrk00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     FIT61_06230 (rpoN)  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     FIT61_06230 (rpoN)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:mrk03021]     FIT61_06230 (rpoN) Transcription machinery [BR:mrk03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      FIT61_06230 (rpoN) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_38 HTH_IclR Motif Other DBs NCBI-ProteinID:  QDD14016 UniProt:  A0AAE6FUJ8 LinkDB All DBs Position 1189025..1190434 Genome browser AA seq 469 aa AA seqDB search MKQNLQFKASQHLSLTPQLQQSIKLLQMSSVELNQELEILIQQNPLIEIFEEEDEEENKN TPTISQEETSFEILNHQEHQEAIYDHEINWGDEYTKDNYAESPDYQEPASQTLKQYLEDI FHLIPISEKDQAIISLLIDSINEDGYLEESLDYFLASIPKEYEVSIEEIESLLKLLQKQA PPGIGARDLIECLTLQLESKEETPIHLLSIKVIKNHLNLLAARDFVRLKKILGCEDEALR DVQKVIKSLNPKPGNIFSTIESHHFIQHEVNVKKVKAKWQVSLNEQAIPKLRLNHIYRDL IKNSQNDVAHHLSSQIQEAKWIVKNIQQRFITILKVSEAIMRHQKDFLDHGESMMKPLVL REIAEEVGLHESTISRVTSNKYINTPRGIYELKFFFGSSIDSASGNELASTAIRAKIKEV IKQGDPKKPLSDNEIVLLLKRQNINIARRTVAKYREILNIAPTNLRKIL NT seq 1410 nt NT seq  +upstreamnt  +downstreamnt atgaaacaaaatcttcaatttaaagcatcccagcatttatcgcttaccccgcaacttcag caatctataaaacttttacaaatgtcttcggttgaacttaaccaagaacttgaaatttta attcaacaaaatcctttgattgaaatatttgaagaagaggatgaggaagaaaacaaaaat accccgacaatttctcaagaagaaacttcatttgaaattttgaatcatcaagaacatcaa gaagctatttatgatcatgaaattaattggggtgacgagtatacaaaagataattacgct gaatcacctgactatcaagaacctgcatcacaaacattaaaacaataccttgaagatatt tttcatttaattccgattagtgaaaaagatcaggctattatttctcttttgatagattca attaatgaagatggttatctagaggagtctcttgattattttttagcaagcattccaaaa gaatatgaggtaagtattgaagaaatagaatctttactaaagcttcttcaaaaacaagct cctcctggtattggcgcaagagacctcatagaatgcctgactcttcaacttgagagtaaa gaagaaactccgattcatttactctctattaaagtaattaagaaccatctaaatctttta gctgcgcgtgactttgtgagacttaaaaaaatactagggtgtgaagatgaagcattaaga gatgttcaaaaagtaattaaaagccttaatccaaaacctggaaatatattttccactatt gaaagtcatcatttcattcaacatgaagttaatgtcaaaaaagtgaaggctaaatggcaa gtttcattaaatgagcaagcgattcccaaacttcgcttaaatcatatttatcgagactta ataaagaactcacaaaatgacgttgcacatcatttatctagtcagatacaagaagctaaa tggattgtgaaaaatatacaacaacgctttatcacaatccttaaagtctccgaggcaatt atgagacatcaaaaagactttttagatcatggcgaatctatgatgaaacctcttgtttta agggagattgctgaagaagtgggccttcatgaatccacaatatctcgcgtcacatcaaat aaatatattaatacgccacgtggtatttatgaactcaaatttttcttcggcagctcgatt gatagtgcgtcagggaatgagcttgcatctaccgcaataagggctaaaattaaagaagtc attaaacaaggagatccgaaaaaaccactttcagataatgaaattgtcttattattgaag aggcaaaatattaatatcgctcgtcgaaccgtagcaaaatatagagaaatactaaatatt gctccaaccaatcttagaaaaattttataa

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