Candidatus Methylopumilus rimovensis: FIT61_06245
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Entry
FIT61_06245 CDS
T10495
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
mrk Candidatus Methylopumilus rimovensis
Brite
KEGG Orthology (KO) [BR:
mrk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrk03019
]
FIT61_06245 (rapZ)
Messenger RNA biogenesis [BR:
mrk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FIT61_06245 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
nSTAND_NTPase5
AAA_23
SKI
Motif
Other DBs
NCBI-ProteinID:
QDD14019
UniProt:
A0AAE6FU30
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Position
1191366..1192205
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AA seq
279 aa
AA seq
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MEVIIISGLSGSGKSIALNALEDNDFYCIDNLPVTLLSNISQHLNHEHQDKVAISVDIRS
IDIEKLPFVIKEIESLSIKTKLIYLESSTESIVRRFGETRRRHPLANEKLSLSETIEKER
SMLAPLAEIGYKIDTSSMSVNALKKALNELIELKEDHLALQFSSFGYKFGIPLDADFIFD
VRCLPNPHYESNLKNLTGLDKSVAEFFQGYNEVNKMYQDINHFVNEWLGSFKKDQRHSLH
IAIGCTGGKHRSVYIANKLFTNFYNPKSQVIIRHRDINH
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcattattatttcaggactatcgggctcaggtaaaagtattgccttaaatgct
ctcgaagacaatgacttttactgtatcgataacttacctgtcacacttttgtcaaatatt
tcacaacatctaaatcatgagcatcaagacaaggttgcaattagtgttgatattagaagt
attgatattgaaaaattacccttcgttataaaagaaattgaatcgttatcaattaaaacg
aagttgatttacctagaatcatccaccgagtctatcgtaagacgatttggtgaaacgaga
cgcagacatccccttgcaaacgaaaagctatctctttctgaaactatagaaaaagaaagg
tctatgcttgcacctttagctgagattggttataaaattgatactagcagcatgtcagta
aatgcattaaagaaagcattgaacgaattgattgagttaaaggaagatcatcttgccttg
caatttagttcgttcggatacaaatttggcatcccacttgatgcagattttatttttgat
gtgcgctgtcttccgaacccacactatgagtctaatttaaaaaatttaactggcttagat
aagtctgttgcagaattttttcaaggctataatgaagtcaataaaatgtatcaagatatc
aatcactttgtaaatgagtggctaggctcttttaaaaaagatcaaagacattcacttcat
atagctattggatgcactgggggcaagcatcgctcagtttatattgcaaataaattattc
actaatttctataacccaaaatctcaggtaattattcgccacagagatattaaccattaa
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