Candidatus Methylopumilus rimovensis: FIT61_06330
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Entry
FIT61_06330 CDS
T10495
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
mrk Candidatus Methylopumilus rimovensis
Pathway
mrk00300
Lysine biosynthesis
mrk00470
D-Amino acid metabolism
mrk01100
Metabolic pathways
mrk01110
Biosynthesis of secondary metabolites
mrk01120
Microbial metabolism in diverse environments
mrk01230
Biosynthesis of amino acids
Module
mrk_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mrk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FIT61_06330 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FIT61_06330 (dapF)
Enzymes [BR:
mrk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
FIT61_06330 (dapF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
TEP1_CUB2
Motif
Other DBs
NCBI-ProteinID:
QDD14036
UniProt:
A0AAE6FUC0
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All DBs
Position
1209371..1210216
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AA seq
281 aa
AA seq
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MKLHFTKMHGIGNDFIVLDHTKSPFQLTQEKIQSLSHRQLGIGFDQLLVVEGSTLKDVDF
KYRIFNQDGSEVEQCGNGARCFYRFVKDKHLTEKELIRVETKSGVITLTEDHEHMIEVNM
GAPIFNPKLIPFISDTEKNEYSISIELPDQKEMINVAVLSMGNPHTVITVEDIDKARVKT
LGAYLESHPLFPKRVNVGFMKIVTPHHIRLRVFERGVGETLACGTGACAAVVSGIKRHLL
TSPVKVDMLGGSLSIDWRGDTNPVMMKGPAVTLFEGDIEIA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttcattttacaaagatgcatggaattggtaacgactttatagtgcttgatcat
acaaagtctcctttccaattaacgcaagagaagattcaatctttatctcatcgacaactc
ggtattggatttgatcagcttctggtggttgagggttcaacactcaaagatgttgatttc
aaatatcgtatttttaatcaagatggtagtgaagtagaacaatgcggtaatggtgcgcgt
tgtttttatcgatttgtaaaagataagcatttaactgaaaaagaattgattcgcgttgaa
acaaaatctggtgtcattacattgactgaagaccacgaacatatgattgaagtaaatatg
ggcgcacccatttttaatcctaaactgattccatttatttcagatacagaaaaaaatgaa
tactctatttctatagagttgccagatcaaaaagaaatgataaatgtagctgtattatct
atgggtaatccgcacacagtgattacagttgaagatattgataaggctcgcgttaaaaca
ttaggtgcttatttggaatcacatccgcttttcccaaaacgtgtgaatgttggatttatg
aaaattgtaacaccacatcatattcgtttacgtgtttttgaaagaggtgtgggtgaaacg
ctcgcctgcggaactggggcgtgtgctgcagtagtgtcagggattaagcgtcatctactt
acctcccctgtgaaagttgatatgctaggggggtcattatctattgattggagaggtgat
acaaatcctgtcatgatgaaaggtccggccgtaaccctcttcgagggagatattgagatc
gcttaa
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