KEGG   Metabacillus rhizosphaerae: WCV66_04580
Entry
WCV66_04580       CDS       T10831                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
mrl  Metabacillus rhizosphaerae
Pathway
mrl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mrl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    WCV66_04580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mrl03019]
    WCV66_04580
Messenger RNA biogenesis [BR:mrl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     WCV66_04580
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1 Lactamase_B_6
Other DBs
NCBI-ProteinID: WXB89517
UniProt: A0ABZ2MVS6
LinkDB
Position
complement(946306..947979)
AA seq 557 aa
MSTKENVLSIFALGGLNEVGKNMYAIEYSNYIVIIDCGNKFPDESLLGIDLIIPDITYLL
ENKDKITALIVTHGHEDHIGGIPFFLKKLNVPVYATRFTLGLIELKLEEHKLLRDTELIE
IDSSSNLNFDDINVTFFKVNHSIPDCLGVVFNTPEGKIVHTGDFKFDLTPANNEHSDIHK
MAEIGRDGVFLLLSESTNSERPGLTPSEQMVGKHVEDAFMKAERKVILSTFASNINRIQQ
VVDAAKKTNRKISLLGRSMVNVVDIAIERGYLTVPDGMIIEQHEINELAPEKVAILCTGS
QGEPLAALARLSTGNFRGVDILPEDTVIFAAGPIPGNERNVTRIVDNLLTLGAKVIYGTG
STSGMHVSGHGYQEDLKLMLTLMKPKYFIPIHGEYRMLHHHRLLAESVGVEQGNTFIMNN
GDVVDITNSIARQTRKIPAGNTYVDGIGVGDVGDMVLRDRKQLSEDGMLVIVLTMSKREG
KLVSEPDTISRGFVFNRDSEELIREVNRLITKTVNDLQKGNKIQWNVIKQSIKKSVGQYL
FTQTKRKPMILPIIIEI
NT seq 1674 nt   +upstreamnt  +downstreamnt
ttgagcacaaaagagaatgtattatctattttcgctttaggtggcttaaatgaagttgga
aagaacatgtatgcaattgaatattccaattatattgtgattatcgactgtggtaataag
ttcccagatgaaagtttattaggaattgatttgattattcctgatattacctacttacta
gaaaataaagataaaataacagcattaatcgttactcatggacatgaagatcatatcgga
ggaatcccgttcttcttaaaaaaattaaatgtacccgtatatgcaacacgtttcacacta
ggtttaattgaattaaaattagaagaacataaactcttaagggatactgaactgattgaa
attgactctagctcaaatttaaatttcgatgacatcaatgtaacttttttcaaagtaaat
catagtattcctgattgcttaggggttgtttttaacacaccagagggaaaaatcgtacat
actggagacttcaagttcgatttgacccccgcgaataatgaacattcggatattcataaa
atggcagaaatcggaagagatggcgtcttccttctactatctgaaagtaccaactcagaa
cgtcctggtttaaccccatcagagcaaatggtaggtaaacatgttgaggacgccttcatg
aaagcagaacgcaaagtaattctttcaacgttcgcttctaatattaatcgcattcagcaa
gttgtggatgctgcaaaaaaaacaaatcgaaagatatcgttacttggacgcagtatggta
aatgtagtggatattgcaattgaacgtggttatttaacagttcctgatgggatgatcatt
gaacaacatgaaatcaatgaattggcccctgaaaaggtagccatcttatgtacggggagc
caaggcgaacctttagcagcccttgcccgattatctactggaaactttcggggtgttgac
attttaccagaggatacggttatttttgcagcaggtccaataccagggaatgaacggaat
gtcacacggatcgtagacaacttactcacacttggagccaaagtgatttacggaacggga
agtacatcaggaatgcatgtatctggccatggctatcaagaagatttaaaactaatgctt
acactaatgaagccaaaatactttatacccatccacggtgagtatagaatgttacaccat
catcgattattagccgaatctgttggagtagaacaaggaaacacatttattatgaacaat
ggtgatgttgtagatattacaaattctattgcccgccaaactcgcaaaataccagcaggc
aatacctatgtggatggaataggtgtaggtgatgtcggggacatggtgttaagagatcgc
aaacaactttctgaagacggaatgctcgtgattgttttaacgatgagtaaaagggaagga
aagctagtttctgaaccagacaccatttcacgtgggttcgtgtttaatagagattctgag
gaactcataagagaagttaatcgccttattacaaaaactgttaacgatctacaaaaaggg
aataaaattcagtggaacgtgattaaacaaagcataaaaaaatcagtaggccaatattta
tttactcaaactaagagaaagccaatgatccttcctataattattgaaatttaa

DBGET integrated database retrieval system