Metabacillus rhizosphaerae: WCV66_04580
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Entry
WCV66_04580 CDS
T10831
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mrl Metabacillus rhizosphaerae
Pathway
mrl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WCV66_04580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrl03019
]
WCV66_04580
Messenger RNA biogenesis [BR:
mrl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
WCV66_04580
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
WXB89517
UniProt:
A0ABZ2MVS6
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Position
complement(946306..947979)
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AA seq
557 aa
AA seq
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MSTKENVLSIFALGGLNEVGKNMYAIEYSNYIVIIDCGNKFPDESLLGIDLIIPDITYLL
ENKDKITALIVTHGHEDHIGGIPFFLKKLNVPVYATRFTLGLIELKLEEHKLLRDTELIE
IDSSSNLNFDDINVTFFKVNHSIPDCLGVVFNTPEGKIVHTGDFKFDLTPANNEHSDIHK
MAEIGRDGVFLLLSESTNSERPGLTPSEQMVGKHVEDAFMKAERKVILSTFASNINRIQQ
VVDAAKKTNRKISLLGRSMVNVVDIAIERGYLTVPDGMIIEQHEINELAPEKVAILCTGS
QGEPLAALARLSTGNFRGVDILPEDTVIFAAGPIPGNERNVTRIVDNLLTLGAKVIYGTG
STSGMHVSGHGYQEDLKLMLTLMKPKYFIPIHGEYRMLHHHRLLAESVGVEQGNTFIMNN
GDVVDITNSIARQTRKIPAGNTYVDGIGVGDVGDMVLRDRKQLSEDGMLVIVLTMSKREG
KLVSEPDTISRGFVFNRDSEELIREVNRLITKTVNDLQKGNKIQWNVIKQSIKKSVGQYL
FTQTKRKPMILPIIIEI
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
ttgagcacaaaagagaatgtattatctattttcgctttaggtggcttaaatgaagttgga
aagaacatgtatgcaattgaatattccaattatattgtgattatcgactgtggtaataag
ttcccagatgaaagtttattaggaattgatttgattattcctgatattacctacttacta
gaaaataaagataaaataacagcattaatcgttactcatggacatgaagatcatatcgga
ggaatcccgttcttcttaaaaaaattaaatgtacccgtatatgcaacacgtttcacacta
ggtttaattgaattaaaattagaagaacataaactcttaagggatactgaactgattgaa
attgactctagctcaaatttaaatttcgatgacatcaatgtaacttttttcaaagtaaat
catagtattcctgattgcttaggggttgtttttaacacaccagagggaaaaatcgtacat
actggagacttcaagttcgatttgacccccgcgaataatgaacattcggatattcataaa
atggcagaaatcggaagagatggcgtcttccttctactatctgaaagtaccaactcagaa
cgtcctggtttaaccccatcagagcaaatggtaggtaaacatgttgaggacgccttcatg
aaagcagaacgcaaagtaattctttcaacgttcgcttctaatattaatcgcattcagcaa
gttgtggatgctgcaaaaaaaacaaatcgaaagatatcgttacttggacgcagtatggta
aatgtagtggatattgcaattgaacgtggttatttaacagttcctgatgggatgatcatt
gaacaacatgaaatcaatgaattggcccctgaaaaggtagccatcttatgtacggggagc
caaggcgaacctttagcagcccttgcccgattatctactggaaactttcggggtgttgac
attttaccagaggatacggttatttttgcagcaggtccaataccagggaatgaacggaat
gtcacacggatcgtagacaacttactcacacttggagccaaagtgatttacggaacggga
agtacatcaggaatgcatgtatctggccatggctatcaagaagatttaaaactaatgctt
acactaatgaagccaaaatactttatacccatccacggtgagtatagaatgttacaccat
catcgattattagccgaatctgttggagtagaacaaggaaacacatttattatgaacaat
ggtgatgttgtagatattacaaattctattgcccgccaaactcgcaaaataccagcaggc
aatacctatgtggatggaataggtgtaggtgatgtcggggacatggtgttaagagatcgc
aaacaactttctgaagacggaatgctcgtgattgttttaacgatgagtaaaagggaagga
aagctagtttctgaaccagacaccatttcacgtgggttcgtgtttaatagagattctgag
gaactcataagagaagttaatcgccttattacaaaaactgttaacgatctacaaaaaggg
aataaaattcagtggaacgtgattaaacaaagcataaaaaaatcagtaggccaatattta
tttactcaaactaagagaaagccaatgatccttcctataattattgaaatttaa
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