Metabacillus rhizosphaerae: WCV66_16885
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Entry
WCV66_16885 CDS
T10831
Symbol
helD
Name
(GenBank) RNA polymerase recycling motor HelD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mrl Metabacillus rhizosphaerae
Pathway
mrl03420
Nucleotide excision repair
mrl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mrl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WCV66_16885 (helD)
03430 Mismatch repair
WCV66_16885 (helD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrl03400
]
WCV66_16885 (helD)
Enzymes [BR:
mrl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WCV66_16885 (helD)
DNA repair and recombination proteins [BR:
mrl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WCV66_16885 (helD)
MMR (mismatch excision repair)
Other MMR factors
WCV66_16885 (helD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
Viral_helicase1
UvrD_C_2
AAA_11
AAA_30
DEAD
AAA_14
ResIII
NACHT
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WXB86923
LinkDB
All DBs
Position
3454050..3456350
Genome browser
AA seq
766 aa
AA seq
DB search
MGQKQHPDFYEEIDRLRFTKKYMEMLIQARELDEESFKKSAKESLEGIDLKDSSLSYLNM
LTNSSMLQRTEEEIRSLKKIYHKPYFARINYKANDKSDEEILYIGKASLFDRETQDPIIV
DWRSPIANLYYDGRLGDVTYEAEGEIYEGNLSLKRQYIIEEEELKAIRDVDLTTTDELLQ
ESLSASSSNRLTDIVSTIQEEQNRIIRADLNKPIIVQGAAGSGKTTIALHRISYFIYTYA
DYFKPEQLMILAPSNLFIDYISEVLPELGVDRILQMTFSDYVKSCISKKIKLTSPSEKLG
KFIDRTYENPEMIQWISSFKGSLDMKIIIDRYLEDILESLIPKKDFYLSKFKLYSAGKMK
HLMQKEYTYLPYYRRLEKIKDVLQNYVRTEKKVLLKKVADFYDEKIEKALYSTRLDPDKR
KSYVTKAMDKKAELMDDILKQSRVGVQAYIRQIEKYDLIHYFDELFTNKDQLVKYAGDIL
DQNQIDFFYDYQVNLRKKRQFEVEDLASLLYLQYHLFGIKKELRARNVVIDEAQDYSYFQ
LYALKSALETDMFTIVGDLAQGIHSYRGLNDWSIVKEDIFPRATYTTLQKSYRTTVEIMH
AANDILSLLPLDLPKVEPVVRHGDKPVFHYWNDEIEAVEKIKAEVQRFYSEGMKTIAVIG
KTERECVKIEKLFRKHASGELRTQLLRENEEINQEDLIIVHSQLAKGLEFDVVLLFALDE
LFELSEIELKLLYVSMTRPLHRLMFFGKSPSVFLLEHIRDDSVTIL
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
ttgggccaaaagcagcatcctgatttttacgaagaaattgatcggctaaggtttacaaaa
aagtatatggaaatgttaattcaagcaagggagcttgatgaagaatcctttaagaaaagt
gccaaggaatctttggaaggaattgacttaaaggatagtagtttaagttacttaaacatg
ctaacaaattcgagtatgcttcaacgaactgaagaagaaatacgtagtctaaaaaaaatc
tatcataagccatatttcgctcgaattaattataaggcgaatgataaaagtgatgaagag
attttatacattggcaaggcgtctctatttgatcgtgaaactcaagatcctattattgtt
gactggcgttctcctattgcaaatctttattatgatgggcggcttggtgacgtaacatac
gaagcagaaggtgaaatatatgaagggaatctatcattaaagagacagtatataattgaa
gaagaagagcttaaagctattcgagatgttgatttaacaaccacagatgaattgctacaa
gaatctctttcagctagttcaagtaatcggttaactgatattgtttcaacaatacaggaa
gaacaaaatagaattattcgagcggatttaaataaacctattattgttcaaggtgcagct
ggaagtggaaaaacaacgattgctcttcaccgaatctcttattttatttatacatatgcc
gattatttcaaaccagagcagctcatgattcttgctccaagcaatttattcattgattat
atatcagaggtcctacccgaacttggggtagaccgaatcttacagatgacgtttagtgat
tatgtcaaaagctgtatctcgaaaaaaataaagctgacatccccatcagaaaagcttgga
aaatttattgatcgaacctatgaaaatcctgaaatgatacaatggatttctagctttaag
gggtcattagatatgaaaatcatcattgaccggtatttagaagatatattggaatctctt
atacctaaaaaggacttttatttatcaaaatttaaactttatagtgccggtaaaatgaaa
catctcatgcaaaaggaatacacgtacttaccttattatcgacgtttggaaaagataaaa
gatgtcttgcaaaactatgtgcgaacagaaaagaaagtactattgaaaaaagtagcagat
ttttacgatgaaaagatagaaaaggctctatatagtacgaggctagatcctgacaaaaga
aaaagctatgttacaaaggcgatggacaaaaaagctgaacttatggacgacattctcaag
caatcccgagtaggggttcaagcatatattagacagattgagaaatatgatcttattcat
tattttgatgaattatttacaaataaagaccaactagtaaaatatgctggagatatatta
gatcagaatcaaatagactttttttatgactatcaagtaaaccttagaaaaaaacgtcaa
tttgaagtagaagatttggcgagtctattatacttacagtatcatctatttggtattaag
aaagagcttcgtgctcgtaatgtagtcattgatgaagcccaagattacagctattttcaa
ctgtatgcacttaagagtgctttggaaacagacatgtttacaatcgtaggagatctagct
caaggtattcactcgtatcgagggttaaacgactggagcatagtaaaggaagacattttt
ccaagagcaacgtataccactttacaaaaaagctacagaacaacggtagaaattatgcac
gcagctaatgatattctttcattattgccattagatcttccgaaagttgagccagtcgtt
cgacatggtgataaacccgtatttcattattggaatgatgaaatagaagcagttgaaaag
attaaagctgaagttcagcgtttttatagtgagggaatgaaaaccattgcagttattggg
aaaacagagagagaatgtgtgaaaatagaaaaattgtttaggaaacatgctagcggggag
ttacgaacacaattacttcgtgaaaatgaagaaatcaaccaagaagacttaatcattgtt
cattcacagctagccaaaggattggagtttgatgttgtcctactttttgctctagacgaa
ctgtttgagcttagtgaaattgaattgaaattactttatgtgtccatgaccagaccattg
caccgattaatgtttttcggaaaaagtccttctgtttttttgttagagcatatacgtgat
gattcggtaacgatattgtag
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